RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 FADS6Q8N9I5 356 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 SFRP2Q96HF1 295 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 FOXC2Q99958 501 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 VSIG4Q9Y279 399 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 TMED3Q9Y3Q3 217 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 EPXP11678 715 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 ACSM5Q6NUN0 579 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 PIK3IP1Q96FE7 263 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 PPT2Q9UMR5 302 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 COL2A1P02458 1487 aaPredicted RBP15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 AFMIDQ63HM1 303 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 APOBEC3DQ96AK3 386 aaPredicted RBP15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 GABARAPL3Q9BY60 117 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 C11orf94C9JXX5 98 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 CST4P01036 141 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 RPS27P42677 84 aaKnown RBP15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 DHRS4L2Q6PKH6 230 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 DMRTA2Q96SC8 542 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 MMP17Q9ULZ9 603 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 PGA4P0DJD7 388 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 PGA5P0DJD9 388 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 PTGFRP43088 359 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 TMEM136Q6ZRR5 245 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 ST8SIA1Q92185 356 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 GPX5O75715 221 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 CD22P20273 847 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 RFLNAQ6ZTI6 216 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 PTX4Q96A99 478 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 OR2A5Q96R48 311 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 RAXQ9Y2V3 346 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 K7ESM1 405 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 LINC00303Q3SY05 128 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 CALHM1Q8IU99 346 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 BVESQ8NE79 360 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 OR4C3Q8NH37 302 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 C20orf27Q9GZN8 174 aa15.5■□□□□ 0.07
CACNA1A-201ENST00000360228 A0A1W2PPC4 97 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 APELAP0DMC3 54 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 MDH2P40926 338 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 IZUMO4Q1ZYL8 232 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 PERPQ96FX8 193 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 TOPAZ1Q8N9V7 1692 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 OR2W3Q7Z3T1 314 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 UBTD2Q8WUN7 234 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 ADTRPQ96IZ2 230 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 FAM74A7A6NL05 159 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 LANCL1O43813 399 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 RNF165Q6ZSG1 346 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 DIRC3C9JPN6 131 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 PDE6DO43924 150 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 ZNF253O75346 499 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 THBS4P35443 961 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 EMDP50402 254 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 GSG1Q2KHT4 349 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 NOXO1Q8NFA2 376 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 ZNF865P0CJ78 1059 aaPredicted RBP15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 FPR2P25090 351 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 METRNLQ641Q3 311 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 TECRQ9NZ01 308 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 HS3ST2Q9Y278 367 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 PCNX1Q96RV3 2341 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 FZD9O00144 591 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 GEMIN2O14893 280 aaKnown RBP15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 SLC6A1P30531 599 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 RASL12Q9NYN1 266 aa15.49■□□□□ 0.07
CACNA1A-201ENST00000360228 TNFSF15O95150 251 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 ZNF26P17031 533 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 ZNF766Q5HY98 468 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 PTCRAQ6ISU1 281 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 NTNG2Q96CW9 530 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 NPPBP16860 134 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 UBALD2Q8IYN6 164 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 OR13H1Q8NG92 308 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 ERRFI1Q9UJM3 462 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 ZMIZ1Q9ULJ6 1067 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 TSPAN12O95859 305 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 SPPL3Q8TCT6 385 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 HIST1H4GQ99525 98 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 C3orf85A0A1B0GTC6 90 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 HIST1H1EP10412 219 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 SLC25A35Q3KQZ1 300 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 NCMAPQ5T1S8 102 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 SYNGR2O43760 224 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 OR5AC1P0C628 307 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 ATF1P18846 271 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 HTRA3P83110 453 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 FUT7Q11130 342 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 PDCD1Q15116 288 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 TNXAQ16473 311 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 SPANXN1Q5VSR9 72 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 ANGPTL4Q9BY76 406 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 RBFOX3A6NFN3 312 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 GSTZ1O43708 216 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 DHRS3O75911 302 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 PAFAH1B2P68402 229 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 RASL11BQ9BPW5 248 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 CDCA4Q9BXL8 241 aa15.48■□□□□ 0.07
CACNA1A-201ENST00000360228 KIR3DL2P43630 455 aa15.47■□□□□ 0.07
CACNA1A-201ENST00000360228 MKRN2OSH3BPM6 223 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms