RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 DYNLT3P51808 116 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 GINS3Q9BRX5 216 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 IFITM10A6NMD0 228 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 COX7A2P2O60397 106 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 IGLV3-25P01717 112 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 CRYABP02511 175 aaKnown RBP5.41□□□□□ -1.54
VPS13B-203ENST00000358544 H2BFSP57053 126 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 C10orf111Q8N326 155 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 ARRDC3Q96B67 414 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 AQP10Q96PS8 301 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 CDC14BO60729 498 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 SLC25A34Q6PIV7 304 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 CDC20BQ86Y33 519 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 OR5D13Q8NGL4 314 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 ZNF764Q96H86 408 aaPredicted RBP5.41□□□□□ -1.54
VPS13B-203ENST00000358544 RNF2Q99496 336 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 ISLRO14498 428 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 ZNF865P0CJ78 1059 aaPredicted RBP5.41□□□□□ -1.54
VPS13B-203ENST00000358544 FOLR2P14207 255 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 EN2P19622 333 aaPredicted RBP5.41□□□□□ -1.54
VPS13B-203ENST00000358544 BTG2P78543 158 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 CNRIP1Q96F85 164 aaPredicted RBP5.41□□□□□ -1.54
VPS13B-203ENST00000358544 SHDQ96IW2 340 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 WDR61Q9GZS3 305 aaKnown RBP5.41□□□□□ -1.54
VPS13B-203ENST00000358544 RARRES3Q9UL19 164 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 PRSS38A1L453 326 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 C1QL1O75973 258 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 IL19Q9UHD0 177 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 SLC45A1Q9Y2W3 748 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 CDC34P49427 236 aaPredicted RBP5.41□□□□□ -1.54
VPS13B-203ENST00000358544 OR10G4Q8NGN3 311 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 OR10G9Q8NGN4 311 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 OR10G7Q8NGN6 311 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 ROBO4Q8WZ75 1007 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 DSPPQ9NZW4 1301 aa5.41□□□□□ -1.54
VPS13B-203ENST00000358544 CD1AP06126 327 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 TCL1AP56279 114 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 TGIF1Q15583 401 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 WDR25Q64LD2 544 aaPredicted RBP5.4□□□□□ -1.54
VPS13B-203ENST00000358544 NRSN2Q9GZP1 204 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 FGF17O60258 216 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 SPINK4O60575 86 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 NXPH2O95156 264 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 B4GALNT1Q00973 533 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 SRYQ05066 204 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 SOSTQ9BQB4 213 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 PIPOXQ9P0Z9 390 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 HSPB8Q9UJY1 196 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 TRBV5-5A0A0J9YX44 114 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 GMPPAQ96IJ6 420 aaPredicted RBP5.4□□□□□ -1.54
VPS13B-203ENST00000358544 A6NNC1 897 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 GPR12P47775 334 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 EFNB2P52799 333 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 EDDM3BP56851 147 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 NUTF2P61970 127 aaKnown RBP5.4□□□□□ -1.54
VPS13B-203ENST00000358544 FAM3AP98173 230 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 CST6Q15828 149 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 FAM69BQ5VUD6 431 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 ZCCHC14Q8WYQ9 949 aaKnown RBP5.4□□□□□ -1.54
VPS13B-203ENST00000358544 BCORQ6W2J9 1755 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 BMPR1BO00238 502 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 BTCP35070 178 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 CDKN2AP42771 156 aaKnown RBP5.4□□□□□ -1.54
VPS13B-203ENST00000358544 PPICP45877 212 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 NR0B2Q15466 257 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 TUBD1Q9UJT1 453 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 KLK13Q9UKR3 277 aa5.4□□□□□ -1.54
VPS13B-203ENST00000358544 CDC42EP2O14613 210 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 HOXA5P20719 270 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 RPS4Y1P22090 263 aaKnown RBP5.4□□□□□ -1.55
VPS13B-203ENST00000358544 ARL16Q0P5N6 197 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 HTR3DQ70Z44 454 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 MBNL1Q9NR56 388 aaKnown RBP5.4□□□□□ -1.55
VPS13B-203ENST00000358544 PCNX3Q9H6A9 2034 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 PDE6DO43924 150 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 PRTGQ2VWP7 1150 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 AAED1Q7RTV5 226 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 MOB3AQ96BX8 217 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 SLC26A1Q9H2B4 701 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 CISD1Q9NZ45 108 aaKnown RBP5.4□□□□□ -1.55
VPS13B-203ENST00000358544 METTL12A8MUP2 240 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 TRDCB7Z8K6 153 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 KLKB1P03952 638 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 SNRPCP09234 159 aaKnown RBP5.4□□□□□ -1.55
VPS13B-203ENST00000358544 RPS16P62249 146 aaKnown RBP5.4□□□□□ -1.55
VPS13B-203ENST00000358544 EWSR1Q01844 656 aaKnown RBP eCLIP5.4□□□□□ -1.55
VPS13B-203ENST00000358544 RTL8BQ17RB0 113 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 BCL2L2Q92843 193 aaPredicted RBP5.4□□□□□ -1.55
VPS13B-203ENST00000358544 AURKAIP1Q9NWT8 199 aaPredicted RBP5.4□□□□□ -1.55
VPS13B-203ENST00000358544 P04436 131 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 MDH2P40926 338 aaKnown RBP5.4□□□□□ -1.55
VPS13B-203ENST00000358544 CSN1S1P47710 185 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 ZNF121P58317 390 aaPredicted RBP5.4□□□□□ -1.55
VPS13B-203ENST00000358544 HHEXQ03014 270 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 SGMS2Q8NHU3 365 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 MRPL30Q8TCC3 161 aaKnown RBP5.4□□□□□ -1.55
VPS13B-203ENST00000358544 OBP2BQ9NPH6 170 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 C3orf85A0A1B0GTC6 90 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 A0A1B0GTH9 108 aa5.4□□□□□ -1.55
VPS13B-203ENST00000358544 PEX11BO96011 259 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms