RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 ZNF343Q6P1L6 599 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 DPPA3Q6W0C5 159 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 C6orf201Q7Z4U5 140 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 TGIF2LXQ8IUE1 241 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 FAM219AQ8IW50 185 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 FAM210BQ96KR6 192 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 MS4A5Q9H3V2 200 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 C20orf141Q9NUB4 165 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 FZR1Q9UM11 496 aa5.73□□□□□ -1.49
UPF2-201ENST00000356352 C5orf52A6NGY3 159 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 M0R2Z0 102 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 DNPH1O43598 174 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 PRKNO60260 465 aaPredicted RBP5.72□□□□□ -1.49
UPF2-201ENST00000356352 MPC2O95563 127 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 OR5AC1P0C628 307 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 NQO2P16083 231 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 KIR3DL2P43630 455 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 SP6Q3SY56 376 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 Q6ZN92 141 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 SAP30LQ9HAJ7 183 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 HSPB8Q9UJY1 196 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 PCDHGA9Q9Y5G4 932 aaKnown RBP5.72□□□□□ -1.49
UPF2-201ENST00000356352 LOXHD1Q8IVV2 1947 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 ANKRD20A5PA0PJZ0 165 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 MFSD2BA6NFX1 497 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 PRSS1P07477 247 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 HOXD4P09016 255 aaPredicted RBP5.72□□□□□ -1.49
UPF2-201ENST00000356352 CISD3P0C7P0 127 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 RAB32Q13637 225 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 TCTN1Q2MV58 587 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 MUC20Q8N307 709 aaPredicted RBP5.72□□□□□ -1.49
UPF2-201ENST00000356352 OR2Y1Q8NGV0 311 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 RPS4Y2Q8TD47 263 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 ATG101Q9BSB4 218 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 ANXA10Q9UJ72 324 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 SBK3P0C264 359 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 PGFP49763 221 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 ZIC1Q15915 447 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 NKG7Q16617 165 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 C10orf113Q5VZT2 155 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 LHX8Q68G74 356 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 INO80CQ6PI98 192 aaPredicted RBP5.72□□□□□ -1.49
UPF2-201ENST00000356352 SLC25A22Q9H936 323 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 LAMB1P07942 1786 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 IGHV3-43A0A0B4J1X8 118 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 SYNGR2O43760 224 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 IGHV3-43DP0DP04 118 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 HIST1H1BP16401 226 aaKnown RBP5.72□□□□□ -1.49
UPF2-201ENST00000356352 HMGA2P52926 109 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 SOX8P57073 446 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 GABRA6Q16445 453 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 KCNMB1Q16558 191 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 FAM78BQ5VT40 261 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 ANKRD34AQ69YU3 496 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 TBC1D26Q86UD7 250 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 GLCCI1Q86VQ1 547 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 TMEM37Q8WXS4 190 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 ORAI1Q96D31 301 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 MYEOVQ96EZ4 313 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 CNTD2Q9H8S5 307 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 UBTD1Q9HAC8 227 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 ZMIZ1Q9ULJ6 1067 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 PAPPA2Q9BXP8 1791 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 RBFOX3A6NFN3 312 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 FXYD1O00168 92 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 AKR7A2O43488 359 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 WNT1P04628 370 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 NPY1RP25929 384 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 TGFBR1P36897 503 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 CRYBB2P43320 205 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 DLX1P56177 255 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 LRP11Q86VZ4 500 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 TGIF2LYQ8IUE0 185 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 ZNF547Q8IVP9 402 aa5.72□□□□□ -1.49
UPF2-201ENST00000356352 A0A1W2PR80 420 aa5.71□□□□□ -1.49
UPF2-201ENST00000356352 A6NDN8 102 aa5.71□□□□□ -1.49
UPF2-201ENST00000356352 C3orf80F5H4A9 247 aa5.71□□□□□ -1.49
UPF2-201ENST00000356352 IFNL4K9M1U5 179 aa5.71□□□□□ -1.49
UPF2-201ENST00000356352 TMPRSS2O15393 492 aa5.71□□□□□ -1.49
UPF2-201ENST00000356352 CRXO43186 299 aaPredicted RBP5.71□□□□□ -1.49
UPF2-201ENST00000356352 ZFPL1O95159 310 aa5.71□□□□□ -1.49
UPF2-201ENST00000356352 MYF5P13349 255 aa5.71□□□□□ -1.49
UPF2-201ENST00000356352 PMELP40967 661 aa5.71□□□□□ -1.49
UPF2-201ENST00000356352 TIAL1Q01085 375 aaKnown RBP eCLIP5.71□□□□□ -1.49
UPF2-201ENST00000356352 RTP5Q14D33 572 aa5.71□□□□□ -1.49
UPF2-201ENST00000356352 CTF1Q16619 201 aa5.71□□□□□ -1.49
UPF2-201ENST00000356352 C9orf50Q5SZB4 431 aa5.71□□□□□ -1.49
UPF2-201ENST00000356352 TMEM88Q6PEY1 159 aa5.71□□□□□ -1.49
UPF2-201ENST00000356352 SCGB1D4Q6XE38 83 aa5.71□□□□□ -1.49
UPF2-201ENST00000356352 RFESDQ8TAC1 157 aa5.71□□□□□ -1.49
UPF2-201ENST00000356352 MYOZ3Q8TDC0 251 aa5.71□□□□□ -1.49
UPF2-201ENST00000356352 DTD1Q8TEA8 209 aa5.71□□□□□ -1.49
UPF2-201ENST00000356352 FLYWCH2Q96CP2 140 aaKnown RBP5.71□□□□□ -1.49
UPF2-201ENST00000356352 GMPPAQ96IJ6 420 aaPredicted RBP5.71□□□□□ -1.49
UPF2-201ENST00000356352 MRPL37Q9BZE1 423 aaKnown RBP5.71□□□□□ -1.49
UPF2-201ENST00000356352 SIRT5Q9NXA8 310 aa5.71□□□□□ -1.49
UPF2-201ENST00000356352 DOK5Q9P104 306 aa5.71□□□□□ -1.49
UPF2-201ENST00000356352 A0A1W2PNV4 684 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 J3QT63 122 aa5.71□□□□□ -1.5
UPF2-201ENST00000356352 ISLRO14498 428 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms