RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 ZNF721Q8TF20 911 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 FAM234AQ9H0X4 552 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 MYOZ1Q9NP98 299 aaPredicted RBP10.84□□□□□ -0.67
COLCA1-201ENST00000355430 SERTAD4Q9NUC0 356 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 SPINK2P20155 84 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 FUT6P51993 359 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 RAC3P60763 192 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 SMIM21Q3B7S5 101 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 SLC36A1Q7Z2H8 476 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 RNF133Q8WVZ7 376 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 HPSE2Q8WWQ2 592 aa10.84□□□□□ -0.67
COLCA1-201ENST00000355430 C16orf97H3BN30 126 aa10.83□□□□□ -0.67
COLCA1-201ENST00000355430 TSPO2Q5TGU0 170 aa10.83□□□□□ -0.67
COLCA1-201ENST00000355430 C15orf54Q8N8G6 183 aa10.83□□□□□ -0.67
COLCA1-201ENST00000355430 OR10X1Q8NGY0 326 aa10.83□□□□□ -0.67
COLCA1-201ENST00000355430 SPSB1Q96BD6 273 aa10.83□□□□□ -0.67
COLCA1-201ENST00000355430 PLXNA3P51805 1871 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 SIRPB1O00241 398 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 DAOP14920 347 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 DHODHQ02127 395 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 OR2B11Q5JQS5 317 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 ZNF429Q86V71 674 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 ISOC2Q96AB3 205 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 SAMD10Q9BYL1 202 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 ZNF816-ZNF321PA0A0X1KG74 233 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 FAM24AA6NFZ4 105 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 ZNF727A8MUV8 499 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 ADAM10O14672 748 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 EFSO43281 561 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 LYZL6O75951 148 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 ZNF205O95201 554 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 IGLV3-19P01714 112 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 AWAT1Q58HT5 328 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 MMP24Q9Y5R2 645 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 SCAF4O95104 1147 aaKnown RBP10.83□□□□□ -0.68
COLCA1-201ENST00000355430 CNIH1O95406 144 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 HLA-HP01893 362 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 SPP1P10451 314 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 KLF3P57682 345 aaPredicted RBP10.83□□□□□ -0.68
COLCA1-201ENST00000355430 TGIF1Q15583 401 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 ZNF774Q6NX45 483 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 BTNL3Q6UXE8 466 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 NUFIP2Q7Z417 695 aaKnown RBP10.83□□□□□ -0.68
COLCA1-201ENST00000355430 CTHRC1Q96CG8 243 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 LRP5LA4QPB2 252 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 OR2A4O95047 310 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 RCC1P18754 421 aaPredicted RBP10.83□□□□□ -0.68
COLCA1-201ENST00000355430 SNCAP37840 140 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 WNT2BQ93097 391 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 OR2A7Q96R45 310 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 TOLLIPQ9H0E2 274 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 MRPL22Q9NWU5 206 aaKnown RBP10.83□□□□□ -0.68
COLCA1-201ENST00000355430 KCNK7Q9Y2U2 307 aa10.83□□□□□ -0.68
COLCA1-201ENST00000355430 GDF9O60383 454 aa10.82□□□□□ -0.68
COLCA1-201ENST00000355430 TTRP02766 147 aa10.82□□□□□ -0.68
COLCA1-201ENST00000355430 ALKBH6Q3KRA9 238 aa10.82□□□□□ -0.68
COLCA1-201ENST00000355430 MRPL24Q96A35 216 aaKnown RBP10.82□□□□□ -0.68
COLCA1-201ENST00000355430 SLC35B3Q9H1N7 401 aa10.82□□□□□ -0.68
COLCA1-201ENST00000355430 PSENENQ9NZ42 101 aa10.82□□□□□ -0.68
COLCA1-201ENST00000355430 ADAM20O43506 726 aa10.82□□□□□ -0.68
COLCA1-201ENST00000355430 FSTP19883 344 aa10.82□□□□□ -0.68
COLCA1-201ENST00000355430 GPM6AP51674 278 aa10.82□□□□□ -0.68
COLCA1-201ENST00000355430 FOXL2P58012 376 aa10.82□□□□□ -0.68
COLCA1-201ENST00000355430 OR2T2Q6IF00 324 aa10.82□□□□□ -0.68
COLCA1-201ENST00000355430 OR2M5A3KFT3 312 aa10.82□□□□□ -0.68
COLCA1-201ENST00000355430 ARG1P05089 322 aa10.82□□□□□ -0.68
COLCA1-201ENST00000355430 CTSDP07339 412 aaPredicted RBP10.82□□□□□ -0.68
COLCA1-201ENST00000355430 FUT3P21217 361 aa10.82□□□□□ -0.68
COLCA1-201ENST00000355430 KCNJ3P48549 501 aa10.82□□□□□ -0.68
COLCA1-201ENST00000355430 RPS11P62280 158 aaKnown RBP eCLIP10.82□□□□□ -0.68
COLCA1-201ENST00000355430 EFNB1P98172 346 aa10.82□□□□□ -0.68
COLCA1-201ENST00000355430 RPUSD4Q96CM3 377 aaKnown RBP10.82□□□□□ -0.68
COLCA1-201ENST00000355430 TTTY12Q9BZ98 90 aa10.82□□□□□ -0.68
COLCA1-201ENST00000355430 ZBTB25P24278 435 aa10.82□□□□□ -0.68
COLCA1-201ENST00000355430 HOXA1P49639 335 aaPredicted RBP10.82□□□□□ -0.68
COLCA1-201ENST00000355430 CLEC12BQ2HXU8 276 aa10.82□□□□□ -0.68
COLCA1-201ENST00000355430 C2orf68Q2NKX9 166 aa10.82□□□□□ -0.68
COLCA1-201ENST00000355430 IGHV1-45A0A0A0MS14 117 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 MDFIC2A0A1B0GVS7 189 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 PUSL1Q8N0Z8 303 aaKnown RBP10.81□□□□□ -0.68
COLCA1-201ENST00000355430 OR2Z1Q8NG97 314 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 OR6X1Q8NH79 312 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 OR5AC2Q9NZP5 309 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 C3orf85A0A1B0GTC6 90 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 A0A1W2PQM1 296 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 GPR37O15354 613 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 TMEM267Q0VDI3 215 aaPredicted RBP10.81□□□□□ -0.68
COLCA1-201ENST00000355430 ZNF260Q3ZCT1 412 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 TEX29Q8N6K0 151 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 OR4F5Q8NH21 305 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 OR4A16Q8NH70 328 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 PTX4Q96A99 478 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 OR4F4Q96R69 305 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 CABLES2Q9BTV7 478 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 SF3B5Q9BWJ5 86 aaKnown RBP10.81□□□□□ -0.68
COLCA1-201ENST00000355430 GAR1Q9NY12 217 aaKnown RBP10.81□□□□□ -0.68
COLCA1-201ENST00000355430 TMED3Q9Y3Q3 217 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 PPP5D1E7EU14 171 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 H7BYZ3 331 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 DXOO77932 396 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms