RNA–Protein interactions for RNA: ENST00000355360.8

PGBD2-202, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGBD2, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-202ENST00000355360 MRPL33O75394 65 aaKnown RBP12.11□□□□□ -0.47
PGBD2-202ENST00000355360 GFRA1P56159 465 aa12.11□□□□□ -0.47
PGBD2-202ENST00000355360 TGIF1Q15583 401 aa12.11□□□□□ -0.47
PGBD2-202ENST00000355360 RAB11FIP2Q7L804 512 aa12.11□□□□□ -0.47
PGBD2-202ENST00000355360 UBALD1Q8TB05 177 aa12.11□□□□□ -0.47
PGBD2-202ENST00000355360 MAGT1Q9H0U3 335 aa12.11□□□□□ -0.47
PGBD2-202ENST00000355360 SLC7A11Q9UPY5 501 aa12.11□□□□□ -0.47
PGBD2-202ENST00000355360 MEMO1Q9Y316 297 aa12.11□□□□□ -0.47
PGBD2-202ENST00000355360 DCHS1Q96JQ0 3298 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 TRAV39A0A0B4J263 110 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 TERTO14746 1132 aaKnown RBP12.1□□□□□ -0.47
PGBD2-202ENST00000355360 SCTP09683 121 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 SFTA3P0C7M3 94 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 PET100P0DJ07 73 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 OMGP23515 440 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 RBM11P57052 281 aaKnown RBP12.1□□□□□ -0.47
PGBD2-202ENST00000355360 ZNF616Q08AN1 781 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 SURF2Q15527 256 aaPredicted RBP12.1□□□□□ -0.47
PGBD2-202ENST00000355360 STK11Q15831 433 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 TMEM268Q5VZI3 342 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 TMEM42Q69YG0 159 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 C6orf15Q6UXA7 325 aaPredicted RBP12.1□□□□□ -0.47
PGBD2-202ENST00000355360 SECTM1Q8WVN6 248 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 RRP8O43159 456 aaKnown RBP12.1□□□□□ -0.47
PGBD2-202ENST00000355360 DUSP3P51452 185 aaPredicted RBP12.1□□□□□ -0.47
PGBD2-202ENST00000355360 SMCO1Q147U7 214 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 SPIN3Q5JUX0 258 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 UQCC3Q6UW78 93 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 C1orf210Q8IVY1 113 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 C17orf78Q8N4C9 275 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 SLC35G3Q8N808 338 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 KCNE4Q8WWG9 221 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 AKR1E2Q96JD6 320 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 C20orf24Q9BUV8 137 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 ARRDC1-AS1Q9H2J1 176 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 BCO1Q9HAY6 547 aa12.1□□□□□ -0.47
PGBD2-202ENST00000355360 RP1L1Q8IWN7 2480 aaPredicted RBP12.09□□□□□ -0.47
PGBD2-202ENST00000355360 C9orf172C9J069 976 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 NEURL1O76050 574 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 JMJD7P0C870 316 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 PPT1P50897 306 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 MALLQ13021 153 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 TRA2AQ13595 282 aaKnown RBP eCLIP12.09□□□□□ -0.47
PGBD2-202ENST00000355360 DHRS11Q6UWP2 260 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 UBALD2Q8IYN6 164 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 NEK7Q8TDX7 302 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 ZNF552Q9H707 407 aaPredicted RBP12.09□□□□□ -0.47
PGBD2-202ENST00000355360 C12orf49Q9H741 205 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 MGAQ8IWI9 3026 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 RNASEK-C17orf49H0YIS7 233 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 SYNGR1O43759 233 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 PDCD6O75340 191 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 PVALBP20472 110 aaPredicted RBP12.09□□□□□ -0.47
PGBD2-202ENST00000355360 SPATA46Q5T0L3 261 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 ATP1A1-AS1Q5TC04 95 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 FBXW12Q6X9E4 464 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 HPSE2Q8WWQ2 592 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 C10orf35Q96D05 121 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 SMIM8Q96KF7 97 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 DNAJB11Q9UBS4 358 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 KCNIP3Q9Y2W7 256 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 PCNX2A6NKB5 2137 aa12.09□□□□□ -0.47
PGBD2-202ENST00000355360 ZNF816-ZNF321PA0A0X1KG74 233 aa12.08□□□□□ -0.47
PGBD2-202ENST00000355360 A0A1W2PR80 420 aa12.08□□□□□ -0.47
PGBD2-202ENST00000355360 RPL35P42766 123 aaKnown RBP12.08□□□□□ -0.47
PGBD2-202ENST00000355360 AKR1D1P51857 326 aa12.08□□□□□ -0.47
PGBD2-202ENST00000355360 FUT6P51993 359 aa12.08□□□□□ -0.47
PGBD2-202ENST00000355360 PRDX4Q13162 271 aa12.08□□□□□ -0.47
PGBD2-202ENST00000355360 CLINT1Q14677 625 aa12.08□□□□□ -0.47
PGBD2-202ENST00000355360 OR8B8Q15620 311 aa12.08□□□□□ -0.47
PGBD2-202ENST00000355360 HFEQ30201 348 aa12.08□□□□□ -0.47
PGBD2-202ENST00000355360 EXTL1Q92935 676 aa12.08□□□□□ -0.47
PGBD2-202ENST00000355360 MSI2Q96DH6 328 aaKnown RBP12.08□□□□□ -0.47
PGBD2-202ENST00000355360 ZNF286AQ9HBT8 521 aa12.08□□□□□ -0.47
PGBD2-202ENST00000355360 RCC2Q9P258 522 aaKnown RBP12.08□□□□□ -0.47
PGBD2-202ENST00000355360 TUBD1Q9UJT1 453 aa12.08□□□□□ -0.47
PGBD2-202ENST00000355360 HSF4Q9ULV5 492 aa12.08□□□□□ -0.47
PGBD2-202ENST00000355360 COL27A1Q8IZC6 1860 aaPredicted RBP12.08□□□□□ -0.48
PGBD2-202ENST00000355360 CACNA1HO95180 2353 aa12.08□□□□□ -0.48
PGBD2-202ENST00000355360 IGKV1D-13A0A0B4J2D9 117 aa12.08□□□□□ -0.48
PGBD2-202ENST00000355360 NKX2-6A6NCS4 301 aa12.08□□□□□ -0.48
PGBD2-202ENST00000355360 CYTIPO60759 359 aa12.08□□□□□ -0.48
PGBD2-202ENST00000355360 IGKV1-13P0DP09 117 aa12.08□□□□□ -0.48
PGBD2-202ENST00000355360 DAOP14920 347 aa12.08□□□□□ -0.48
PGBD2-202ENST00000355360 ITGA3P26006 1051 aa12.08□□□□□ -0.48
PGBD2-202ENST00000355360 CAV2P51636 162 aa12.08□□□□□ -0.48
PGBD2-202ENST00000355360 HOXA4Q00056 320 aaPredicted RBP12.08□□□□□ -0.48
PGBD2-202ENST00000355360 STARD10Q9Y365 291 aa12.08□□□□□ -0.48
PGBD2-202ENST00000355360 ARHGAP21Q5T5U3 1957 aa12.08□□□□□ -0.48
PGBD2-202ENST00000355360 CST4P01036 141 aa12.08□□□□□ -0.48
PGBD2-202ENST00000355360 PPYP01298 95 aa12.08□□□□□ -0.48
PGBD2-202ENST00000355360 CYC1P08574 325 aa12.08□□□□□ -0.48
PGBD2-202ENST00000355360 HERV-K104P61576 105 aa12.08□□□□□ -0.48
PGBD2-202ENST00000355360 IZUMO4Q1ZYL8 232 aa12.08□□□□□ -0.48
PGBD2-202ENST00000355360 MIDNQ504T8 468 aa12.08□□□□□ -0.48
PGBD2-202ENST00000355360 LIAT1Q6ZQX7 453 aa12.08□□□□□ -0.48
PGBD2-202ENST00000355360 OR2M7Q8NG81 312 aa12.08□□□□□ -0.48
PGBD2-202ENST00000355360 DECR2Q9NUI1 292 aa12.08□□□□□ -0.48
PGBD2-202ENST00000355360 HSD17B6O14756 317 aa12.07□□□□□ -0.48
PGBD2-202ENST00000355360 HS3ST1O14792 307 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms