RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 RAB5CP51148 216 aa9.26□□□□□ -0.93
RTN3-204ENST00000354497 DAP3P51398 398 aaKnown RBP9.26□□□□□ -0.93
RTN3-204ENST00000354497 CDK6Q00534 326 aa9.26□□□□□ -0.93
RTN3-204ENST00000354497 NHLH2Q02577 135 aa9.26□□□□□ -0.93
RTN3-204ENST00000354497 RNASE10Q5GAN6 216 aaKnown RBP9.26□□□□□ -0.93
RTN3-204ENST00000354497 REEP3Q6NUK4 255 aa9.26□□□□□ -0.93
RTN3-204ENST00000354497 CFAP161Q6P656 301 aa9.26□□□□□ -0.93
RTN3-204ENST00000354497 MEGF10Q96KG7 1140 aa9.26□□□□□ -0.93
RTN3-204ENST00000354497 MRPL13Q9BYD1 178 aaKnown RBP9.26□□□□□ -0.93
RTN3-204ENST00000354497 BARHL1Q9BZE3 327 aa9.26□□□□□ -0.93
RTN3-204ENST00000354497 TUBA4BQ9H853 241 aa9.26□□□□□ -0.93
RTN3-204ENST00000354497 NLKQ9UBE8 527 aa9.26□□□□□ -0.93
RTN3-204ENST00000354497 TIMM10BQ9Y5J6 103 aa9.26□□□□□ -0.93
RTN3-204ENST00000354497 TRBV23-1A0A0A0MS06 115 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 SMLR1H3BR10 107 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 GSTA4O15217 222 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 MPIG6BO95866 241 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 GIPP09681 153 aaPredicted RBP9.25□□□□□ -0.93
RTN3-204ENST00000354497 KITLGP21583 273 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 GUCA1AP43080 201 aaPredicted RBP9.25□□□□□ -0.93
RTN3-204ENST00000354497 RAP2BP61225 183 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 PCBD1P61457 104 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 RPL18Q07020 188 aaKnown RBP9.25□□□□□ -0.93
RTN3-204ENST00000354497 HABP2Q14520 560 aaPredicted RBP9.25□□□□□ -0.93
RTN3-204ENST00000354497 C21orf62-AS1Q17RA5 79 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 ENTPD8Q5MY95 495 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 ZNF613Q6PF04 617 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 LDLRAD3Q86YD5 345 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 LAX1Q8IWV1 398 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 C1orf87Q8N0U7 546 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 LYG1Q8N1E2 194 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 DIRAS2Q96HU8 199 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 CMSS1Q9BQ75 279 aaKnown RBP9.25□□□□□ -0.93
RTN3-204ENST00000354497 CHCHD6Q9BRQ6 235 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 RIBC2Q9H4K1 309 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 GFOD1Q9NXC2 390 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 ZIM2Q9NZV7 527 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 SLC7A7Q9UM01 511 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 STARD10Q9Y365 291 aa9.25□□□□□ -0.93
RTN3-204ENST00000354497 G3V3Q6 166 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 MPZL2O60487 215 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 SERPINA3P01011 423 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 CST2P09228 141 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 SPARCP09486 303 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 ASAH2BP0C7U1 165 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 RHCEP18577 417 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 RCC1P18754 421 aaPredicted RBP9.24□□□□□ -0.93
RTN3-204ENST00000354497 GABRA5P31644 462 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 AQP2P41181 271 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 POLR2JP52435 117 aaKnown RBP9.24□□□□□ -0.93
RTN3-204ENST00000354497 SNRPEP62304 92 aaKnown RBP9.24□□□□□ -0.93
RTN3-204ENST00000354497 SCARB2Q14108 478 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 SNAPC1Q16533 368 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 PYDC2Q56P42 97 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 FAM27BQ5VT28 67 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 FAHD1Q6P587 224 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 AHSA2Q719I0 299 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 GID4Q8IVV7 300 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 BOLLQ8N9W6 283 aaKnown RBP9.24□□□□□ -0.93
RTN3-204ENST00000354497 PHYHIPLQ96FC7 376 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 CXorf58Q96LI9 332 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 SEPHS2Q99611 448 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 MGLLQ99685 303 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 SPACA1Q9HBV2 294 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 ISYNA1Q9NPH2 558 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 FOXJ3Q9UPW0 622 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 SIGLEC9Q9Y336 463 aa9.24□□□□□ -0.93
RTN3-204ENST00000354497 LOC100506127A0A0U1RQW1 187 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 ELOVL7A1L3X0 281 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 MCRIP1C9JLW8 97 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 F5H5P2 479 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 DOK2O60496 412 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 OPN1SWP03999 348 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 NR2C1P13056 603 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 MMP9P14780 707 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 PSMA1P25786 263 aaKnown RBP9.23□□□□□ -0.93
RTN3-204ENST00000354497 GNALP38405 381 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 ARF6P62330 175 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 RAP1AP62834 184 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 NSUN5P1Q3KNT7 163 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 SLC35E4Q6ICL7 350 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 OR2T2Q6IF00 324 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 BAIAP2L2Q6UXY1 529 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 LINC00114Q6XXX2 140 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 MSANTD1Q6ZTZ1 278 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 MOB3CQ70IA8 216 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 SLC30A8Q8IWU4 369 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 Q8N402 240 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 FTMTQ8N4E7 242 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 PNLDC1Q8NA58 520 aaKnown RBP9.23□□□□□ -0.93
RTN3-204ENST00000354497 BHLHE23Q8NDY6 225 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 PXT1Q8NFP0 134 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 OR9I1Q8NGQ6 314 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 APH1BQ8WW43 257 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 GGHQ92820 318 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 HAVCR1Q96D42 359 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 GGACTQ9BVM4 153 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 TMEM138Q9NPI0 162 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 VPREB3Q9UKI3 123 aa9.23□□□□□ -0.93
RTN3-204ENST00000354497 DNAH3Q8TD57 4116 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms