RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 SPATA46Q5T0L3 261 aa17.42■□□□□ 0.38
CHRNA3-202ENST00000348639 INO80CQ6PI98 192 aaPredicted RBP17.42■□□□□ 0.38
CHRNA3-202ENST00000348639 Q6ZS49 121 aa17.42■□□□□ 0.38
CHRNA3-202ENST00000348639 INO80EQ8NBZ0 244 aaPredicted RBP17.42■□□□□ 0.38
CHRNA3-202ENST00000348639 WDR13Q9H1Z4 485 aa17.42■□□□□ 0.38
CHRNA3-202ENST00000348639 CDH20Q9HBT6 801 aa17.42■□□□□ 0.38
CHRNA3-202ENST00000348639 MPTX1A8MV57 137 aa17.42■□□□□ 0.38
CHRNA3-202ENST00000348639 BCL2L11O43521 198 aa17.42■□□□□ 0.38
CHRNA3-202ENST00000348639 SPDEFO95238 335 aa17.42■□□□□ 0.38
CHRNA3-202ENST00000348639 CA6P23280 308 aa17.42■□□□□ 0.38
CHRNA3-202ENST00000348639 FCGR2CP31995 323 aa17.42■□□□□ 0.38
CHRNA3-202ENST00000348639 RBMXP38159 391 aaKnown RBP17.42■□□□□ 0.38
CHRNA3-202ENST00000348639 IDH3GP51553 393 aaPredicted RBP17.42■□□□□ 0.38
CHRNA3-202ENST00000348639 IL24Q13007 206 aa17.42■□□□□ 0.38
CHRNA3-202ENST00000348639 BOD1Q96IK1 185 aa17.42■□□□□ 0.38
CHRNA3-202ENST00000348639 C2orf50Q96LR7 162 aa17.42■□□□□ 0.38
CHRNA3-202ENST00000348639 LHX6Q9UPM6 363 aa17.42■□□□□ 0.38
CHRNA3-202ENST00000348639 TEX13DA0A0J9YY54 714 aaPredicted RBP17.41■□□□□ 0.38
CHRNA3-202ENST00000348639 PPP1CBP62140 327 aa17.41■□□□□ 0.38
CHRNA3-202ENST00000348639 TSC22D1Q15714 1073 aa17.41■□□□□ 0.38
CHRNA3-202ENST00000348639 IGFL3Q6UXB1 125 aa17.41■□□□□ 0.38
CHRNA3-202ENST00000348639 LINC00596Q86U02 117 aa17.41■□□□□ 0.38
CHRNA3-202ENST00000348639 TOMM40LQ969M1 308 aa17.41■□□□□ 0.38
CHRNA3-202ENST00000348639 PIK3IP1Q96FE7 263 aa17.41■□□□□ 0.38
CHRNA3-202ENST00000348639 OR10C1Q96KK4 312 aa17.41■□□□□ 0.38
CHRNA3-202ENST00000348639 RNF126Q9BV68 326 aa17.41■□□□□ 0.38
CHRNA3-202ENST00000348639 PKIBQ9C010 78 aa17.41■□□□□ 0.38
CHRNA3-202ENST00000348639 IL36RNQ9UBH0 155 aa17.41■□□□□ 0.38
CHRNA3-202ENST00000348639 PTPRZ1P23471 2315 aaPredicted RBP17.41■□□□□ 0.38
CHRNA3-202ENST00000348639 AHRRA9YTQ3 701 aa17.4■□□□□ 0.38
CHRNA3-202ENST00000348639 NMBP08949 121 aa17.4■□□□□ 0.38
CHRNA3-202ENST00000348639 COX5AP20674 150 aa17.4■□□□□ 0.38
CHRNA3-202ENST00000348639 GLP1RP43220 463 aa17.4■□□□□ 0.38
CHRNA3-202ENST00000348639 PIGPP57054 158 aa17.4■□□□□ 0.38
CHRNA3-202ENST00000348639 ACSF3Q4G176 576 aaPredicted RBP17.4■□□□□ 0.38
CHRNA3-202ENST00000348639 OR2A2Q6IF42 318 aa17.4■□□□□ 0.38
CHRNA3-202ENST00000348639 ZNF585AQ6P3V2 769 aa17.4■□□□□ 0.38
CHRNA3-202ENST00000348639 VWA1Q6PCB0 445 aa17.4■□□□□ 0.38
CHRNA3-202ENST00000348639 ST8SIA2Q92186 375 aa17.4■□□□□ 0.38
CHRNA3-202ENST00000348639 MOB3AQ96BX8 217 aa17.4■□□□□ 0.38
CHRNA3-202ENST00000348639 MICU1Q9BPX6 476 aa17.4■□□□□ 0.38
CHRNA3-202ENST00000348639 OR51I2Q9H344 312 aa17.4■□□□□ 0.38
CHRNA3-202ENST00000348639 MGAQ8IWI9 3026 aa17.4■□□□□ 0.38
CHRNA3-202ENST00000348639 ZNF205O95201 554 aa17.4■□□□□ 0.38
CHRNA3-202ENST00000348639 NAPSAO96009 420 aa17.4■□□□□ 0.38
CHRNA3-202ENST00000348639 UCP3P55916 312 aa17.4■□□□□ 0.38
CHRNA3-202ENST00000348639 MARVELD3Q96A59 401 aa17.4■□□□□ 0.38
CHRNA3-202ENST00000348639 RLN2P04090 185 aa17.39■□□□□ 0.37
CHRNA3-202ENST00000348639 HOXB5P09067 269 aa17.39■□□□□ 0.37
CHRNA3-202ENST00000348639 PRKACAP17612 351 aa17.39■□□□□ 0.37
CHRNA3-202ENST00000348639 SPINK2P20155 84 aa17.39■□□□□ 0.37
CHRNA3-202ENST00000348639 IL15RAQ13261 267 aa17.39■□□□□ 0.37
CHRNA3-202ENST00000348639 BEX5Q5H9J7 111 aa17.39■□□□□ 0.37
CHRNA3-202ENST00000348639 POC1AQ8NBT0 407 aa17.39■□□□□ 0.37
CHRNA3-202ENST00000348639 C1orf162Q8NEQ5 155 aaPredicted RBP17.39■□□□□ 0.37
CHRNA3-202ENST00000348639 DCUN1D4Q92564 292 aa17.39■□□□□ 0.37
CHRNA3-202ENST00000348639 OR2J1Q9GZK6 312 aa17.39■□□□□ 0.37
CHRNA3-202ENST00000348639 SPACA1Q9HBV2 294 aa17.39■□□□□ 0.37
CHRNA3-202ENST00000348639 Q9N2K0 584 aa17.39■□□□□ 0.37
CHRNA3-202ENST00000348639 PROB1E7EW31 1015 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 H0YIZ8 118 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 LYL1P12980 280 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 CBR1P16152 277 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 P2RX3P56373 397 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 FXYD4P59646 89 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 ABCA11PQ4W5N1 156 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 RTL8AQ9BWD3 113 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 RHOFQ9HBH0 211 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 PLSCR4Q9NRQ2 329 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 MED9Q9NWA0 146 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 KCNIP3Q9Y2W7 256 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 SVILO95425 2214 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 J3QT63 122 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 RAC2P15153 192 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 UCP2P55851 309 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 FOXF2Q12947 444 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 RBM39Q14498 530 aaKnown RBP17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 IL13RA2Q14627 380 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 RGS7BPQ6MZT1 257 aaPredicted RBP17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 PRSS54Q6PEW0 395 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 SLC38A6Q8IZM9 456 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 FAM58AQ8N1B3 248 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 SNIP1Q8TAD8 396 aaKnown RBP17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 GTF3AQ92664 365 aaKnown RBP17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 GALNT14Q96FL9 552 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 CCDC120Q96HB5 630 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 ZNF488Q96MN9 340 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 NAA60Q9H7X0 242 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 MEMO1Q9Y316 297 aa17.38■□□□□ 0.37
CHRNA3-202ENST00000348639 HOXC12P31275 282 aa17.37■□□□□ 0.37
CHRNA3-202ENST00000348639 FAM76BQ5HYJ3 339 aa17.37■□□□□ 0.37
CHRNA3-202ENST00000348639 THOC7Q6I9Y2 204 aaKnown RBP17.37■□□□□ 0.37
CHRNA3-202ENST00000348639 RTN4IP1Q8WWV3 396 aaPredicted RBP17.37■□□□□ 0.37
CHRNA3-202ENST00000348639 C1QTNF6Q9BXI9 259 aa17.37■□□□□ 0.37
CHRNA3-202ENST00000348639 DKK4Q9UBT3 224 aa17.37■□□□□ 0.37
CHRNA3-202ENST00000348639 IGKV3-15P01624 115 aa17.37■□□□□ 0.37
CHRNA3-202ENST00000348639 PDGFAP04085 211 aa17.37■□□□□ 0.37
CHRNA3-202ENST00000348639 AADACP22760 399 aa17.37■□□□□ 0.37
CHRNA3-202ENST00000348639 DUSP1P28562 367 aa17.37■□□□□ 0.37
CHRNA3-202ENST00000348639 LUMP51884 338 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms