RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 ERVFRD-1P60508 538 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 GRK1Q15835 563 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 NKAIN3Q8N8D7 197 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 ZSCAN4Q8NAM6 433 aaPredicted RBP10.93□□□□□ -0.66
TUBD1-202ENST00000340993 TMEM104Q8NE00 496 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 RAB40AQ8WXH6 277 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 MED30Q96HR3 178 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 CENPOQ9BU64 300 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 SSR3Q9UNL2 185 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 ST3GAL6Q9Y274 331 aa10.93□□□□□ -0.66
TUBD1-202ENST00000340993 TRDV1A0A1B0GX56 115 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 A8MXK9 166 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 DEGS1O15121 323 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 OR7C1O76099 320 aaPredicted RBP10.92□□□□□ -0.66
TUBD1-202ENST00000340993 MPIG6BO95866 241 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 TK1P04183 234 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 CLEC2LP0C7M8 214 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 NPY4RP50391 375 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 FGF12P61328 243 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 ATAD3CQ5T2N8 411 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 ATPAF1Q5TC12 328 aaPredicted RBP10.92□□□□□ -0.66
TUBD1-202ENST00000340993 SAXO1Q8IYX7 474 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 OSR2Q8N2R0 312 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 ZNF561Q8N587 486 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 PXT1Q8NFP0 134 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 OR4S1Q8NGB4 309 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 SDSLQ96GA7 329 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 MRI1Q9BV20 369 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 SELENOIQ9C0D9 397 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 SIRT7Q9NRC8 400 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 GLS2Q9UI32 602 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 RPUSD1Q9UJJ7 312 aaKnown RBP10.92□□□□□ -0.66
TUBD1-202ENST00000340993 INSIG2Q9Y5U4 225 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 AUP1Q9Y679 476 aa10.92□□□□□ -0.66
TUBD1-202ENST00000340993 PPIAL4CA0A0B4J2A2 164 aa10.91□□□□□ -0.66
TUBD1-202ENST00000340993 A0A1W2PRD5 423 aa10.91□□□□□ -0.66
TUBD1-202ENST00000340993 A0A1W2PRF3 423 aa10.91□□□□□ -0.66
TUBD1-202ENST00000340993 A0A1W2PRM7 423 aa10.91□□□□□ -0.66
TUBD1-202ENST00000340993 SH2D1BO14796 132 aa10.91□□□□□ -0.66
TUBD1-202ENST00000340993 ENSAO43768 121 aaKnown RBP10.91□□□□□ -0.66
TUBD1-202ENST00000340993 FSTL3O95633 263 aa10.91□□□□□ -0.66
TUBD1-202ENST00000340993 PPIAL4GP0DN37 164 aa10.91□□□□□ -0.66
TUBD1-202ENST00000340993 MTNR1BP49286 362 aa10.91□□□□□ -0.66
TUBD1-202ENST00000340993 TAF9Q16594 264 aa10.91□□□□□ -0.66
TUBD1-202ENST00000340993 C17orf107Q6ZR85 190 aa10.91□□□□□ -0.66
TUBD1-202ENST00000340993 GDPD3Q7L5L3 318 aa10.91□□□□□ -0.66
TUBD1-202ENST00000340993 DYRK2Q92630 601 aa10.91□□□□□ -0.66
TUBD1-202ENST00000340993 DCTN5Q9BTE1 182 aa10.91□□□□□ -0.66
TUBD1-202ENST00000340993 MEGF11A6BM72 1044 aa10.9□□□□□ -0.66
TUBD1-202ENST00000340993 CHRM2P08172 466 aa10.9□□□□□ -0.66
TUBD1-202ENST00000340993 SLC2A2P11168 524 aaPredicted RBP10.9□□□□□ -0.66
TUBD1-202ENST00000340993 CCL3L1P16619 93 aa10.9□□□□□ -0.66
TUBD1-202ENST00000340993 HTR2CP28335 458 aa10.9□□□□□ -0.66
TUBD1-202ENST00000340993 OR3A1P47881 315 aa10.9□□□□□ -0.66
TUBD1-202ENST00000340993 RPL31P62899 125 aaKnown RBP10.9□□□□□ -0.66
TUBD1-202ENST00000340993 SRSF2Q01130 221 aaKnown RBP10.9□□□□□ -0.66
TUBD1-202ENST00000340993 PAX2Q02962 417 aa10.9□□□□□ -0.66
TUBD1-202ENST00000340993 AESQ08117 197 aa10.9□□□□□ -0.66
TUBD1-202ENST00000340993 PLA2G7Q13093 441 aa10.9□□□□□ -0.66
TUBD1-202ENST00000340993 ZNF273Q14593 569 aa10.9□□□□□ -0.66
TUBD1-202ENST00000340993 ZNF146Q15072 292 aa10.9□□□□□ -0.66
TUBD1-202ENST00000340993 RAB11BQ15907 218 aa10.9□□□□□ -0.66
TUBD1-202ENST00000340993 CHRFAM7AQ494W8 412 aa10.9□□□□□ -0.66
TUBD1-202ENST00000340993 Q6P435 159 aa10.9□□□□□ -0.66
TUBD1-202ENST00000340993 RTN4RL2Q86UN3 420 aa10.9□□□□□ -0.66
TUBD1-202ENST00000340993 PHYHIPQ92561 330 aa10.9□□□□□ -0.66
TUBD1-202ENST00000340993 DNTTIP1Q9H147 329 aa10.9□□□□□ -0.66
TUBD1-202ENST00000340993 OPN4Q9UHM6 478 aa10.9□□□□□ -0.66
TUBD1-202ENST00000340993 SOX21Q9Y651 276 aaPredicted RBP10.9□□□□□ -0.66
TUBD1-202ENST00000340993 TRAV39A0A0B4J263 110 aa10.9□□□□□ -0.67
TUBD1-202ENST00000340993 TRAV40A0A0B4J280 105 aa10.9□□□□□ -0.67
TUBD1-202ENST00000340993 K7N7A8 449 aa10.9□□□□□ -0.67
TUBD1-202ENST00000340993 SLC33A1O00400 549 aaPredicted RBP10.9□□□□□ -0.67
TUBD1-202ENST00000340993 ZNF737O75373 536 aa10.9□□□□□ -0.67
TUBD1-202ENST00000340993 GTF2F2P13984 249 aa10.9□□□□□ -0.67
TUBD1-202ENST00000340993 MGMTP16455 207 aa10.9□□□□□ -0.67
TUBD1-202ENST00000340993 HNF1AP20823 631 aa10.9□□□□□ -0.67
TUBD1-202ENST00000340993 SDC2P34741 201 aa10.9□□□□□ -0.67
TUBD1-202ENST00000340993 RBM11P57052 281 aaKnown RBP10.9□□□□□ -0.67
TUBD1-202ENST00000340993 KLRD1Q13241 179 aa10.9□□□□□ -0.67
TUBD1-202ENST00000340993 PAN3Q58A45 887 aaKnown RBP10.9□□□□□ -0.67
TUBD1-202ENST00000340993 SPIN3Q5JUX0 258 aa10.9□□□□□ -0.67
TUBD1-202ENST00000340993 NKAPLQ5M9Q1 402 aa10.9□□□□□ -0.67
TUBD1-202ENST00000340993 CD276Q5ZPR3 534 aa10.9□□□□□ -0.67
TUBD1-202ENST00000340993 CD200R1LQ6Q8B3 271 aa10.9□□□□□ -0.67
TUBD1-202ENST00000340993 TRAPPC6BQ86SZ2 158 aa10.9□□□□□ -0.67
TUBD1-202ENST00000340993 NR2C2APQ86WQ0 139 aa10.9□□□□□ -0.67
TUBD1-202ENST00000340993 LYPD6Q86Y78 171 aa10.9□□□□□ -0.67
TUBD1-202ENST00000340993 OR51D1Q8NGF3 324 aa10.9□□□□□ -0.67
TUBD1-202ENST00000340993 NEK7Q8TDX7 302 aa10.9□□□□□ -0.67
TUBD1-202ENST00000340993 C1orf147Q96MC9 270 aaPredicted RBP10.9□□□□□ -0.67
TUBD1-202ENST00000340993 NICN1Q9BSH3 213 aa10.9□□□□□ -0.67
TUBD1-202ENST00000340993 MRPS26Q9BYN8 205 aaKnown RBP10.9□□□□□ -0.67
TUBD1-202ENST00000340993 TRAV24A0A0B4J272 114 aa10.89□□□□□ -0.67
TUBD1-202ENST00000340993 A0A0G2JK05 382 aa10.89□□□□□ -0.67
TUBD1-202ENST00000340993 AIREO43918 545 aa10.89□□□□□ -0.67
TUBD1-202ENST00000340993 TOX4O94842 621 aa10.89□□□□□ -0.67
TUBD1-202ENST00000340993 IGHV4-38-2P0DP08 117 aa10.89□□□□□ -0.67
TUBD1-202ENST00000340993 SRD5A1P18405 259 aa10.89□□□□□ -0.67
TUBD1-202ENST00000340993 RAB3BP20337 219 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms