RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 MAB21L1Q13394 359 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 MOGAT2Q3SYC2 334 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 RNASE10Q5GAN6 216 aaKnown RBP6.06□□□□□ -1.44
NUP43-201ENST00000340413 AGAP6Q5VW22 663 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 ZNF497Q6ZNH5 498 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 C20orf204Q6ZNR8 217 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 SNX29P2Q8IUI4 249 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 CORO2AQ92828 525 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 SLAMF9Q96A28 289 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 CACNG6Q9BXT2 260 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 Q9N2K0 584 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 GAB2Q9UQC2 676 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 SFTPBP07988 381 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 FCGR3AP08637 254 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 C11orf71Q6IPW1 123 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 KCTD9Q7L273 389 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 NRARPQ7Z6K4 114 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 SPICQ8N5J4 248 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 TCTEX1D1Q8N7M0 179 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 PLPPR2Q96GM1 343 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 CMSS1Q9BQ75 279 aaKnown RBP6.06□□□□□ -1.44
NUP43-201ENST00000340413 GHITMQ9H3K2 345 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 DLL4Q9NR61 685 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 CBLN4Q9NTU7 201 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 ZNF222Q9UK12 451 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 CACNA1CQ13936 2221 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 CHD3Q12873 2000 aaKnown RBP6.06□□□□□ -1.44
NUP43-201ENST00000340413 SPRY1O43609 319 aaPredicted RBP6.06□□□□□ -1.44
NUP43-201ENST00000340413 LANCL1O43813 399 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 H2AFB2P0C5Z0 115 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 HLA-GP17693 338 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 SNRPD2P62316 118 aaKnown RBP6.06□□□□□ -1.44
NUP43-201ENST00000340413 TNFAIP6P98066 277 aaPredicted RBP6.06□□□□□ -1.44
NUP43-201ENST00000340413 SRSF4Q08170 494 aaKnown RBP6.06□□□□□ -1.44
NUP43-201ENST00000340413 HMGN3Q15651 99 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 OVCH2Q7RTZ1 564 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 C8orf31Q8N9H6 132 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 ZBTB34Q8NCN2 500 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 OR4C16Q8NGL9 310 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 OR5H2Q8NGV7 314 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 NICN1Q9BSH3 213 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 DPCDQ9BVM2 203 aaPredicted RBP6.06□□□□□ -1.44
NUP43-201ENST00000340413 ANXA10Q9UJ72 324 aa6.06□□□□□ -1.44
NUP43-201ENST00000340413 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.05□□□□□ -1.44
NUP43-201ENST00000340413 TMEM30CPA0ZSE6 113 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 ZSCAN5BA6NJL1 495 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 TRDCB7Z8K6 153 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 SLC33A1O00400 549 aaPredicted RBP6.05□□□□□ -1.44
NUP43-201ENST00000340413 HS3ST1O14792 307 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 OR4A8P0C604 315 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 IRF2P14316 349 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 PRKACAP17612 351 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 ERVS71-1P61550 626 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 TAGLNQ01995 201 aaKnown RBP6.05□□□□□ -1.44
NUP43-201ENST00000340413 MEF2CQ06413 473 aaPredicted RBP6.05□□□□□ -1.44
NUP43-201ENST00000340413 ARFRP1Q13795 201 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 SLC22A25Q6T423 547 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 FBXW5Q969U6 566 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 PIK3IP1Q96FE7 263 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 CRIM1Q9NZV1 1036 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 AK3Q9UIJ7 227 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 E7EQL1 145 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 INMT-MINDY4F8WBC2 141 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 LGALS8O00214 317 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 TNFRSF13BO14836 293 aaPredicted RBP6.05□□□□□ -1.44
NUP43-201ENST00000340413 ZNHIT1O43257 154 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 HAND1O96004 215 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 RBP4P02753 201 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 TLE1Q04724 770 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 CADM3Q8N126 398 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 MUC20Q8N307 709 aaPredicted RBP6.05□□□□□ -1.44
NUP43-201ENST00000340413 GCSAMQ8N6F7 178 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 SUMF2Q8NBJ7 301 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 OR4K15Q8NH41 348 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 C20orf85Q9H1P6 137 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 BANF2Q9H503 90 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 NLKQ9UBE8 527 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 DNAJC13O75165 2243 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 DUXBA0A1W2PPF3 345 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 A0A1W2PR80 420 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 TMEM235A6NFC5 223 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 MGST3O14880 152 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 GEMIN2O14893 280 aaKnown RBP6.05□□□□□ -1.44
NUP43-201ENST00000340413 SYNGR1O43759 233 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 NXPH2O95156 264 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 GNB3P16520 340 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 GNLYP22749 145 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 ARPC4P59998 168 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 HLA-DRB3P79483 266 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 HTD2P86397 168 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 NKPD1Q17RQ9 610 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 ESCO2Q56NI9 601 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 STUMQ69YW2 141 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 GLDNQ6ZMI3 551 aaPredicted RBP6.05□□□□□ -1.44
NUP43-201ENST00000340413 BEST4Q8NFU0 473 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 OR52M1Q8NGK5 317 aa6.05□□□□□ -1.44
NUP43-201ENST00000340413 VRK1Q99986 396 aaPredicted RBP6.05□□□□□ -1.44
NUP43-201ENST00000340413 TRAV38-1A0A0B4J264 116 aa6.04□□□□□ -1.44
NUP43-201ENST00000340413 MEIOCA2RUB1 952 aa6.04□□□□□ -1.44
NUP43-201ENST00000340413 NKX6-3A6NJ46 265 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms