RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 GABRA2P47869 451 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 GABRA4P48169 554 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 FGF8P55075 233 aaPredicted RBP7.18□□□□□ -1.26
HPS4-201ENST00000336873 CASP6P55212 293 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 FOXG1P55316 489 aaPredicted RBP7.18□□□□□ -1.26
HPS4-201ENST00000336873 SOHLH1Q5JUK2 328 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 SUMF2Q8NBJ7 301 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 OR52H1Q8NGJ2 320 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 EMG1Q92979 244 aaKnown RBP7.18□□□□□ -1.26
HPS4-201ENST00000336873 CPNE4Q96A23 557 aaPredicted RBP7.18□□□□□ -1.26
HPS4-201ENST00000336873 SRXN1Q9BYN0 137 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 STRADBQ9C0K7 418 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 B4GALT7Q9UBV7 327 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 MUC6Q6W4X9 2439 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 ZNF816-ZNF321PA0A0X1KG74 233 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 A0A1W2PQD3 144 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 TMEM218A2RU14 115 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 GJE1A6NN92 205 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 ANKRD30BLA7E2S9 258 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 ZNF724A8MTY0 619 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 UMAD1C9J7I0 102 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 RNASEK-C17orf49H0YIS7 233 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 TMEM127O75204 238 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 NXPH2O95156 264 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 KRASP01116 189 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 HOXD4P09016 255 aaPredicted RBP7.18□□□□□ -1.26
HPS4-201ENST00000336873 NQO2P16083 231 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 RAB13P51153 203 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 RAB11AP62491 216 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 TMEM267Q0VDI3 215 aaPredicted RBP7.18□□□□□ -1.26
HPS4-201ENST00000336873 HIKESHIQ53FT3 197 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 ADPRHL1Q8NDY3 354 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 OR6X1Q8NH79 312 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 EXTL1Q92935 676 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 PRRX2Q99811 253 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 PCED1AQ9H1Q7 454 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 PLK3Q9H4B4 646 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 BCO1Q9HAY6 547 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 FAM212BQ9NTI7 297 aaPredicted RBP7.18□□□□□ -1.26
HPS4-201ENST00000336873 GNG13Q9P2W3 67 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 ERRFI1Q9UJM3 462 aaPredicted RBP7.18□□□□□ -1.26
HPS4-201ENST00000336873 NUP210LQ5VU65 1888 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 A0A0A6YYD4 124 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 RNF222A6NCQ9 220 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 MFSD2BA6NFX1 497 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 H0YIZ8 118 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 GP1BAP07359 652 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 GSTP1P09211 210 aaKnown RBP7.18□□□□□ -1.26
HPS4-201ENST00000336873 HNF1AP20823 631 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 PTAFRP25105 342 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 S100A2P29034 98 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 P2RY4P51582 365 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 HOXA4Q00056 320 aaPredicted RBP7.18□□□□□ -1.26
HPS4-201ENST00000336873 PMP22Q01453 160 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 THNSL2Q86YJ6 484 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 OR10AD1Q8NGE0 317 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 NINJ1Q92982 152 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 AURKAIP1Q9NWT8 199 aaPredicted RBP7.18□□□□□ -1.26
HPS4-201ENST00000336873 ANXA10Q9UJ72 324 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 TIMM10BQ9Y5J6 103 aa7.18□□□□□ -1.26
HPS4-201ENST00000336873 MSTNO14793 375 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 AQP8O94778 261 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 CLDN1O95832 211 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 IFNA5P01569 189 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 FBP1P09467 338 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 DSCR4P56555 118 aaPredicted RBP7.17□□□□□ -1.26
HPS4-201ENST00000336873 ETFRF1Q6IPR1 90 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 ARRDC1Q8N5I2 433 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 CCDC54Q8NEL0 328 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 HAS2Q92819 552 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 SH3BGRL3Q9H299 93 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 UQCC1Q9NVA1 299 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 RASL12Q9NYN1 266 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 CHD8Q9HCK8 2581 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 LOC102725191A0A1B0GVB3 256 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 CD300LBA8K4G0 201 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 ZNF587BE7ETH6 402 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 H7C1Q1 480 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 ADAM20O43506 726 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 SNRPCP09234 159 aaKnown RBP7.17□□□□□ -1.26
HPS4-201ENST00000336873 MUC1P15941 1255 aaPredicted RBP7.17□□□□□ -1.26
HPS4-201ENST00000336873 AADACP22760 399 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 PSG4Q00888 419 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 TGFBR3Q03167 851 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 CLN3Q13286 438 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 LPCAT3Q6P1A2 487 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 DEGS2Q6QHC5 323 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 DTWD2Q8NBA8 298 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 OR52M1Q8NGK5 317 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 TCTEX1D2Q8WW35 142 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 APH1AQ96BI3 265 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 PIK3IP1Q96FE7 263 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 CDH20Q9HBT6 801 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 A0A1B0GTI1 187 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 A0A1B0GV90 55 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 AQP7P3A6NL99 342 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 NPIPB7O75200 414 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 TFF1P04155 84 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 SCTP09683 121 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 CD37P11049 281 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms