RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 TMUB1Q9BVT8 246 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 SSBP3Q9BWW4 388 aaPredicted RBP11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 DCSTAMPQ9H295 470 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 LPAR2Q9HBW0 351 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 CLN8Q9UBY8 286 aa11.71□□□□□ -0.53
APOBEC3B-202ENST00000335760 GEMIN2O14893 280 aaKnown RBP11.7□□□□□ -0.54
APOBEC3B-202ENST00000335760 PHF1O43189 567 aaPredicted RBP11.7□□□□□ -0.54
APOBEC3B-202ENST00000335760 FCN3O75636 299 aa11.7□□□□□ -0.54
APOBEC3B-202ENST00000335760 OR2H2O95918 312 aa11.7□□□□□ -0.54
APOBEC3B-202ENST00000335760 IGHV4-31P0DP07 118 aa11.7□□□□□ -0.54
APOBEC3B-202ENST00000335760 GZMKP49863 264 aa11.7□□□□□ -0.54
APOBEC3B-202ENST00000335760 NPY4RP50391 375 aa11.7□□□□□ -0.54
APOBEC3B-202ENST00000335760 LCN2P80188 198 aa11.7□□□□□ -0.54
APOBEC3B-202ENST00000335760 LRRC10Q5BKY1 277 aa11.7□□□□□ -0.54
APOBEC3B-202ENST00000335760 OR2W3Q7Z3T1 314 aa11.7□□□□□ -0.54
APOBEC3B-202ENST00000335760 LINC01356Q8N9X3 169 aa11.7□□□□□ -0.54
APOBEC3B-202ENST00000335760 ST8SIA4Q92187 359 aa11.7□□□□□ -0.54
APOBEC3B-202ENST00000335760 ISOC1Q96CN7 298 aa11.7□□□□□ -0.54
APOBEC3B-202ENST00000335760 C1orf159Q96HA4 380 aa11.7□□□□□ -0.54
APOBEC3B-202ENST00000335760 TMEM59Q9BXS4 323 aa11.7□□□□□ -0.54
APOBEC3B-202ENST00000335760 SLC25A10Q9UBX3 287 aaPredicted RBP11.7□□□□□ -0.54
APOBEC3B-202ENST00000335760 YLPM1P49750 1951 aaKnown RBP11.7□□□□□ -0.54
APOBEC3B-202ENST00000335760 TMEM272A0A1B0GTI8 110 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 TMEM82A0PJX8 343 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 B4DSR2 109 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 H3BMQ9 156 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 FOXH1O75593 365 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 OR7C1O76099 320 aaPredicted RBP11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 TK1P04183 234 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 INHBBP09529 407 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 NDUFB7P17568 137 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 GABRR1P24046 479 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 ZFP36P26651 326 aaKnown RBP11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 RPS27AP62979 156 aaKnown RBP11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 PLA2G7Q13093 441 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 SPCS2Q15005 226 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 TAF9Q16594 264 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 MPV17LQ2QL34 196 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 CYB5R2Q6BCY4 276 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 LINC00596Q86U02 117 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 CROCCP3Q8IVE0 287 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 SLC25A46Q96AG3 418 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 MSI2Q96DH6 328 aaKnown RBP11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 SNX22Q96L94 193 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 Q96M66 194 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 ZNF581Q9P0T4 197 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 FBLN5Q9UBX5 448 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 OR5V1Q9UGF6 321 aa11.69□□□□□ -0.54
APOBEC3B-202ENST00000335760 KIAA1324LA8MWY0 1029 aaPredicted RBP11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 K7N7A8 449 aa11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 SLC33A1O00400 549 aaPredicted RBP11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 LDLRAD4O15165 306 aa11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 PSPNO60542 156 aa11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 ZNF737O75373 536 aa11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 PAHP00439 452 aa11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 SNRPBP14678 240 aaKnown RBP11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 LMO1P25800 156 aa11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 C17orf107Q6ZR85 190 aa11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 CHST4Q8NCG5 386 aa11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 OR4S1Q8NGB4 309 aa11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 H1FXQ92522 213 aaKnown RBP11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 URM1Q9BTM9 101 aaKnown RBP11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 TM2D1Q9BX74 207 aa11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 BARHL1Q9BZE3 327 aa11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 CHST6Q9GZX3 395 aa11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 FAM234AQ9H0X4 552 aa11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 RBM38Q9H0Z9 239 aaKnown RBP11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 LPAR5Q9H1C0 372 aa11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 RAB22AQ9UL26 194 aa11.68□□□□□ -0.54
APOBEC3B-202ENST00000335760 LOC105371242A0A075B767 164 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 TRAV24A0A0B4J272 114 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 A8MXK9 166 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 HSPB6O14558 160 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 TMEM127O75204 238 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 TGFAP01135 160 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 MSMBP08118 114 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 FOSL1P15407 271 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 ZNF16P17020 682 aaPredicted RBP11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 OR3A1P47881 315 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 RORCP51449 518 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 EFNB2P52799 333 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 GRK1Q15835 563 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 PAN3Q58A45 887 aaKnown RBP11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 ATAD3CQ5T2N8 411 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 CD276Q5ZPR3 534 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 BTN2A1Q7KYR7 527 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 OR8H2Q8N162 312 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 SUMF2Q8NBJ7 301 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 OR5D13Q8NGL4 314 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 PPP1R35Q8TAP8 253 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 LGALS14Q8TCE9 139 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 NICN1Q9BSH3 213 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 SHARPINQ9H0F6 387 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 PPA2Q9H2U2 334 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 IFT22Q9H7X7 185 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 RSL24D1Q9UHA3 163 aaKnown RBP11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 CREBBPQ92793 2442 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 A0A0A6YYD4 124 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 SMIM31A0A1B0GVY4 71 aa11.67□□□□□ -0.54
APOBEC3B-202ENST00000335760 DPPA5A6NC42 116 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms