RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 TMEM222Q9H0R3 208 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 SIRT7Q9NRC8 400 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 DKKL1Q9UK85 242 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 TCFL5Q9UL49 500 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 ST3GAL6Q9Y274 331 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 XIRP2A4UGR9 3374 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 GEMIN2O14893 280 aaKnown RBP12□□□□□ -0.49
MKS1-201ENST00000313863 SYNGR3O43761 229 aa12□□□□□ -0.49
MKS1-201ENST00000313863 FUT3P21217 361 aa12□□□□□ -0.49
MKS1-201ENST00000313863 RND3P61587 244 aa12□□□□□ -0.49
MKS1-201ENST00000313863 ZNF385CQ66K41 422 aaPredicted RBP12□□□□□ -0.49
MKS1-201ENST00000313863 ZNF695Q8IW36 515 aa12□□□□□ -0.49
MKS1-201ENST00000313863 RBMXL1Q96E39 390 aaKnown RBP12□□□□□ -0.49
MKS1-201ENST00000313863 TOLLIPQ9H0E2 274 aa12□□□□□ -0.49
MKS1-201ENST00000313863 UBE2J1Q9Y385 318 aaPredicted RBP12□□□□□ -0.49
MKS1-201ENST00000313863 ABCA7Q8IZY2 2146 aa12□□□□□ -0.49
MKS1-201ENST00000313863 IGKV1-27A0A075B6S5 117 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 FAM90A10PA6NDY2 464 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 FAM90A18PA6NE21 464 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 FAM90A16PA6NEW6 464 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 FAM90A20PA6NIJ5 464 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 FAM90A8PA6NJQ4 464 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 FAM90A7PA6NKC0 464 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 FAM90A22PA8MWA6 464 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 FAM90A12PA8MX19 464 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 FAM90A5PA8MXJ8 464 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 FAM90A23PA8MXZ1 464 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 BCAT2O15382 392 aaPredicted RBP11.99□□□□□ -0.49
MKS1-201ENST00000313863 TIAF1O95411 115 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 PPYP01298 95 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 FAM90A15PP0C7V4 464 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 FAM90A13PP0C7W8 464 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 FAM90A14PP0C7W9 464 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 FAM90A24PP0C7X0 464 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 MYF5P13349 255 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 LIFP15018 202 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 AADACP22760 399 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 ATP6V0CP27449 155 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 KIAA0141Q14154 515 aaPredicted RBP11.99□□□□□ -0.49
MKS1-201ENST00000313863 TGIF1Q15583 401 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 EXT1Q16394 746 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 SRSF7Q16629 238 aaKnown RBP eCLIP11.99□□□□□ -0.49
MKS1-201ENST00000313863 MEX3BQ6ZN04 569 aaKnown RBP11.99□□□□□ -0.49
MKS1-201ENST00000313863 Q6ZS49 121 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 DTX1Q86Y01 620 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 OR2AE1Q8NHA4 323 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 TMEM56Q96MV1 263 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 YPEL4Q96NS1 127 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 C11orf1Q9H5F2 150 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 ZNF442Q9H7R0 627 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 LYRM2Q9NU23 88 aaPredicted RBP11.99□□□□□ -0.49
MKS1-201ENST00000313863 MRPS17Q9Y2R5 130 aaKnown RBP11.99□□□□□ -0.49
MKS1-201ENST00000313863 TMEM56-RWDD3S4R434 201 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 RANBP2P49792 3224 aaKnown RBP11.99□□□□□ -0.49
MKS1-201ENST00000313863 ZNF732B4DXR9 585 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 HSPB1P04792 205 aaKnown RBP11.99□□□□□ -0.49
MKS1-201ENST00000313863 HOXA5P20719 270 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 S100A2P29034 98 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 RPS10P46783 165 aaKnown RBP11.99□□□□□ -0.49
MKS1-201ENST00000313863 RBM11P57052 281 aaKnown RBP11.99□□□□□ -0.49
MKS1-201ENST00000313863 UBE2KP61086 200 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 PCBD1P61457 104 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 RAC1P63000 192 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 TLE4Q04727 773 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 PIGYQ3MUY2 71 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 ZNF574Q6ZN55 896 aaPredicted RBP11.99□□□□□ -0.49
MKS1-201ENST00000313863 CPT1CQ8TCG5 803 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 MUCL1Q96DR8 90 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 TP53RKQ96S44 253 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 ZNF700Q9H0M5 742 aa11.99□□□□□ -0.49
MKS1-201ENST00000313863 NKX2-6A6NCS4 301 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 OR6C6A6NF89 314 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 H3BQ15 152 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 ITGA3P26006 1051 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 RGS19P49795 217 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 FOXO1Q12778 655 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.98□□□□□ -0.49
MKS1-201ENST00000313863 PPP1R3BQ86XI6 285 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 OR11L1Q8NGX0 322 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 EDARADDQ8WWZ3 215 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 DNASE2BQ8WZ79 361 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 BCL2L14Q9BZR8 327 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 HIPK2Q9H2X6 1198 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 WDR54Q9H977 334 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 DMRT1Q9Y5R6 373 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 RTTNQ86VV8 2226 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 IGHV3-15A0A0B4J1V0 119 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 FAM24AA6NFZ4 105 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 PPIHO43447 177 aaKnown RBP11.98□□□□□ -0.49
MKS1-201ENST00000313863 TAGLN2P37802 199 aaKnown RBP11.98□□□□□ -0.49
MKS1-201ENST00000313863 CDX1P47902 265 aaPredicted RBP11.98□□□□□ -0.49
MKS1-201ENST00000313863 OR8G1Q15617 311 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 KRTAP27-1Q3LI81 207 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 ZNF506Q5JVG8 444 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 AKR1C8PQ5T2L2 129 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 ZNF774Q6NX45 483 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 ZIC4Q8N9L1 334 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 UCN2Q96RP3 112 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 OPA3Q9H6K4 179 aa11.98□□□□□ -0.49
MKS1-201ENST00000313863 RYDENQ9NUL5 291 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms