RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 HOXC5Q00444 222 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 SQSTM1Q13501 440 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 Q56UQ5 140 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 BAGE3Q86Y29 109 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 BAGE2Q86Y30 109 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 DNAJC5GQ8N7S2 189 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 TMEM99Q8N816 258 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF383Q8NA42 475 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 UBAC2Q8NBM4 344 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 CHST5Q9GZS9 411 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 PPIL3Q9H2H8 161 aaKnown RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 MYEF2Q9P2K5 600 aaKnown RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 LRP12Q9Y561 859 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 PLXNA3P51805 1871 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 GAPDHP04406 335 aaKnown RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ALOX5APP20292 161 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 FOXF1Q12946 379 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 BTN1A1Q13410 526 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 FZD5Q13467 585 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 SLC9A3R2Q15599 337 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF66Q6ZN08 573 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 HMGN2P46Q86SG4 172 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF418Q8TF45 676 aaPredicted RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ABHD14BQ96IU4 210 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 TMUB1Q9BVT8 246 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 MED29Q9NX70 200 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 IGHV3-20A0A0C4DH32 117 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 PEX11BO96011 259 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 MBPP02686 304 aaPredicted RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 MGST1P10620 155 aaKnown RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 CDK5Q00535 292 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 RELQ04864 619 aaPredicted RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 PHLDA2Q53GA4 152 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 WDR73Q6P4I2 378 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 FAM90A1Q86YD7 464 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 SAXO1Q8IYX7 474 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 DEFB108BQ8NET1 73 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 OR1L8Q8NGR8 309 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ABHD3Q8WU67 409 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 RDH5Q92781 318 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 EXTL1Q92935 676 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 C2orf50Q96LR7 162 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ARHGDIGQ99819 225 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 PLA2G12AQ9BZM1 189 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF275Q9NSD4 429 aaPredicted RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 U3KQ87 197 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ZFYVE26Q68DK2 2539 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 SIRPB1O00241 398 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 SYNGR3O43761 229 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 CD1AP06126 327 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 CRISP2P16562 243 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 RPL12P30050 165 aaKnown RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 TSPOP30536 169 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 CEACAM6P40199 344 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 GALR1P47211 349 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ASAH1Q13510 395 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 OXA1LQ15070 435 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 LGALSLQ3ZCW2 172 aaPredicted RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 PAPPA-AS1Q5QFB9 102 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 OR4A47Q6IF82 309 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 FAM122BQ7Z309 247 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 LYG2Q86SG7 212 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 FJX1Q86VR8 437 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 OR5AP2Q8NGF4 316 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 OR4A5Q8NH83 315 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 LHX4Q969G2 390 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 SLC25A33Q9BSK2 321 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 BEX2Q9BXY8 128 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 BEX1Q9HBH7 125 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF586Q9NXT0 402 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 DNAJB12Q9NXW2 375 aaKnown RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 TUBD1Q9UJT1 453 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 TIMM8BQ9Y5J9 83 aaPredicted RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ANKHD1Q8IWZ3 2542 aaKnown RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 A0A1W2PQF6 199 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 SMIM30A4D0T7 59 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 FITM1A5D6W6 292 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 LIPT2A6NK58 231 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 DLL1O00548 723 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 CDS2O95674 445 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 PMP2P02689 132 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 OPN1LWP04000 364 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ACSM4P0C7M7 580 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 EDN3P14138 238 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 HCCSP53701 268 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 EXOSC2Q13868 293 aaKnown RBP2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF260Q3ZCT1 412 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF385BQ569K4 471 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 PABPC1L2AQ5JQF8 200 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 Q6ZN92 141 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF547Q8IVP9 402 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 TMEM217Q8N7C4 229 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 PXT1Q8NFP0 134 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 MARC2Q969Z3 335 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF426Q9BUY5 554 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 Q9N2K0 584 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ANXA10Q9UJ72 324 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 ARHGAP21Q5T5U3 1957 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 PRR19A6NJB7 356 aa2.82□□□□□ -1.96
CLOCK-201ENST00000309964 FCMRO60667 390 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms