RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 CALCRP30988 508 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 ADAM8P78325 824 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 LCN2P80188 198 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 PJVKQ0ZLH3 352 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 APOFQ13790 326 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 GGTLC2Q14390 218 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 ZNF774Q6NX45 483 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 BCDIN3DQ7Z5W3 292 aaKnown RBP7.04□□□□□ -1.28
CHD6-201ENST00000309279 DHRSXQ8N5I4 330 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 ZNF555Q8NEP9 628 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 SLC30A7Q8NEW0 376 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 TFAP2CQ92754 450 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 ZMYND19Q96E35 227 aaPredicted RBP7.04□□□□□ -1.28
CHD6-201ENST00000309279 POM121L2Q96KW2 1035 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 ATG101Q9BSB4 218 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 PNRC2Q9NPJ4 139 aaKnown RBP7.04□□□□□ -1.28
CHD6-201ENST00000309279 LRP12Q9Y561 859 aa7.04□□□□□ -1.28
CHD6-201ENST00000309279 DSCAMO60469 2012 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 VPS13CQ709C8 3753 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 FAM172BPA6NC97 362 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 DAOP14920 347 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 HTR1FP30939 366 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 RCVRNP35243 200 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 ISL1P61371 349 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 RPS7P62081 194 aaKnown RBP7.03□□□□□ -1.28
CHD6-201ENST00000309279 FOXE3Q13461 319 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 RAB35Q15286 201 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 TBC1D28Q2M2D7 210 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 RSPO1Q2MKA7 263 aaPredicted RBP7.03□□□□□ -1.28
CHD6-201ENST00000309279 ZNF672Q499Z4 452 aaPredicted RBP7.03□□□□□ -1.28
CHD6-201ENST00000309279 ELFN2Q5R3F8 820 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 SHFQ7M4L6 423 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 DPY19L4Q7Z388 723 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 CDC20BQ86Y33 519 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 STHQ8IWL8 128 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 LAX1Q8IWV1 398 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 Q8N402 240 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 NUP37Q8NFH4 326 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 OR4F15Q8NGB8 312 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 OR1J2Q8NGS2 313 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 OR2AJ1Q8NGZ0 328 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 OR1F12Q8NHA8 337 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 RPL3LQ92901 407 aaKnown RBP7.03□□□□□ -1.28
CHD6-201ENST00000309279 ORAI1Q96D31 301 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 AJUBAQ96IF1 538 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 ZNF582Q96NG8 517 aaPredicted RBP7.03□□□□□ -1.28
CHD6-201ENST00000309279 APOL4Q9BPW4 351 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 DCUN1D5Q9BTE7 237 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 MRI1Q9BV20 369 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 PPIL3Q9H2H8 161 aaKnown RBP7.03□□□□□ -1.28
CHD6-201ENST00000309279 KCNK15Q9H427 330 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 PLEKHJ1Q9NW61 149 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 POLR1DQ9Y2S0 133 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 NOTCH2Q04721 2471 aa7.03□□□□□ -1.28
CHD6-201ENST00000309279 ANKRD17O75179 2603 aaKnown RBP7.02□□□□□ -1.29
CHD6-201ENST00000309279 FAM90A10PA6NDY2 464 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 ENTPD6O75354 484 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 CLIC3O95833 236 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 NR4A1P22736 598 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 PCSK6P29122 969 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 APLNRP35414 380 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 RPS27P42677 84 aaKnown RBP7.02□□□□□ -1.29
CHD6-201ENST00000309279 AQP4P55087 323 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 CDH11P55287 796 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 KRTAP10-9P60411 292 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 HGFACQ04756 655 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 AESQ08117 197 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 ECH1Q13011 328 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 KRTAP27-1Q3LI81 207 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 OR2G6Q5TZ20 316 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 ACSM6Q6P461 480 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 SIGLEC15Q6ZMC9 328 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 IL17RELQ6ZVW7 336 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 ERI1Q8IV48 349 aaKnown RBP7.02□□□□□ -1.29
CHD6-201ENST00000309279 SYS1Q8N2H4 156 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 STX19Q8N4C7 294 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 PAQR4Q8N4S7 273 aaPredicted RBP7.02□□□□□ -1.29
CHD6-201ENST00000309279 C11orf44Q8N8P7 122 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 KBTBD8Q8NFY9 601 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 OTOSQ8NHW6 89 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 APH1BQ8WW43 257 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 CYGBQ8WWM9 190 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 COX4I2Q96KJ9 171 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 PFDN5Q99471 154 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 ADGRL4Q9HBW9 690 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 DNAJC27Q9NZQ0 273 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 HSPE1-MOB4S4R3N1 261 aa7.02□□□□□ -1.29
CHD6-201ENST00000309279 PPIAL4EA0A075B759 164 aa7.01□□□□□ -1.29
CHD6-201ENST00000309279 C5orf49A4QMS7 147 aa7.01□□□□□ -1.29
CHD6-201ENST00000309279 E7EQL1 145 aa7.01□□□□□ -1.29
CHD6-201ENST00000309279 IFNA21P01568 189 aa7.01□□□□□ -1.29
CHD6-201ENST00000309279 CD5P06127 495 aa7.01□□□□□ -1.29
CHD6-201ENST00000309279 PPIAL4FP0DN26 164 aa7.01□□□□□ -1.29
CHD6-201ENST00000309279 SPP1P10451 314 aa7.01□□□□□ -1.29
CHD6-201ENST00000309279 ALOX5APP20292 161 aa7.01□□□□□ -1.29
CHD6-201ENST00000309279 GLRXP35754 106 aa7.01□□□□□ -1.29
CHD6-201ENST00000309279 IER3P46695 156 aa7.01□□□□□ -1.29
CHD6-201ENST00000309279 ERVK11-1P61568 191 aa7.01□□□□□ -1.29
CHD6-201ENST00000309279 NUTF2P61970 127 aaKnown RBP7.01□□□□□ -1.29
CHD6-201ENST00000309279 MAD2L1BPQ15013 274 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms