RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 M0QYG6 137 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 RAB27BO00194 218 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 LGALS8O00214 317 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF208O43345 1280 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 HCRTR2O43614 444 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 FADS1O60427 444 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 SNAPINO95295 136 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 PLGP00747 810 aaPredicted RBP4.22□□□□□ -1.73
CKS1B-201ENST00000308987 IGHG3P01860 377 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 HLA-AP01891 365 aaKnown RBP4.22□□□□□ -1.73
CKS1B-201ENST00000308987 HLA-DQA2P01906 255 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 IFNA6P05013 189 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 FCER2P06734 321 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 CRHP06850 196 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 SPARCP09486 303 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 PET100P0DJ07 73 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 CTLA4P16410 223 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 PAX6P26367 422 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 IL12BP29460 328 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 APOBEC1P41238 236 aaKnown RBP4.22□□□□□ -1.73
CKS1B-201ENST00000308987 HOXA1P49639 335 aaPredicted RBP4.22□□□□□ -1.73
CKS1B-201ENST00000308987 LUMP51884 338 aaPredicted RBP4.22□□□□□ -1.73
CKS1B-201ENST00000308987 LCN6P62502 163 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 BLOC1S1P78537 153 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 S100A12P80511 92 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 QRFPP83859 136 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 SCRN3Q0VDG4 424 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 FOXO1Q12778 655 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 MYBPHQ13203 477 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 EBPQ15125 230 aaKnown RBP4.22□□□□□ -1.73
CKS1B-201ENST00000308987 PPA1Q15181 289 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 SURF2Q15527 256 aaPredicted RBP4.22□□□□□ -1.73
CKS1B-201ENST00000308987 TAF13Q15543 124 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 TSC22D1Q15714 1073 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 CDNFQ49AH0 187 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 TMEM128Q5BJH2 165 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 DHRS7BQ6IAN0 325 aaPredicted RBP4.22□□□□□ -1.73
CKS1B-201ENST00000308987 TMEM211Q6ICI0 200 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 EIF5AL1Q6IS14 154 aaKnown RBP4.22□□□□□ -1.73
CKS1B-201ENST00000308987 SLC29A4Q7RTT9 530 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 NAA40Q86UY6 237 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 HOGA1Q86XE5 327 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 SKA3Q8IX90 412 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 BAP18Q8IXM2 172 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 SPAG16Q8N0X2 631 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 KDM8Q8N371 416 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 GTPBP8Q8N3Z3 284 aaPredicted RBP4.22□□□□□ -1.73
CKS1B-201ENST00000308987 TMEM251Q8N6I4 163 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF321PQ8N8H1 164 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF441Q8N8Z8 693 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 RELL2Q8NC24 303 aaPredicted RBP4.22□□□□□ -1.73
CKS1B-201ENST00000308987 NAXEQ8NCW5 288 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 CCDC54Q8NEL0 328 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 BPIFCQ8NFQ6 507 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 OR2M7Q8NG81 312 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 OR1M1Q8NGA1 313 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 OR4K17Q8NGC6 315 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 OR5AP2Q8NGF4 316 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 OR5D14Q8NGL3 314 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 OR1J2Q8NGS2 313 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 OR13C3Q8NGS6 347 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 OR10R2Q8NGX6 335 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 OR8S1Q8NH09 359 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 OR8K3Q8NH51 312 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 TERB2Q8NHR7 220 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 KCNG3Q8TAE7 436 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 ST7LQ8TDW4 575 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF721Q8TF20 911 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 RNF133Q8WVZ7 376 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 PIK3IP1Q96FE7 263 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF471Q9BX82 626 aaPredicted RBP4.22□□□□□ -1.73
CKS1B-201ENST00000308987 C1QTNF6Q9BXI9 259 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 SEC11CQ9BY50 192 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 TBL1XR1Q9BZK7 514 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 CST11Q9H112 138 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 WDR13Q9H1Z4 485 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 CHMP1AQ9HD42 196 aaPredicted RBP4.22□□□□□ -1.73
CKS1B-201ENST00000308987 RAB18Q9NP72 206 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 MMP26Q9NRE1 261 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 TAS2R4Q9NYW5 299 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 KLHL13Q9P2N7 655 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 SPRR3Q9UBC9 169 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 GHRLQ9UBU3 117 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF629Q9UEG4 869 aaPredicted RBP4.22□□□□□ -1.73
CKS1B-201ENST00000308987 VSIG4Q9Y279 399 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 KLF13Q9Y2Y9 288 aaPredicted RBP4.22□□□□□ -1.73
CKS1B-201ENST00000308987 TENM1Q9UKZ4 2725 aa4.22□□□□□ -1.73
CKS1B-201ENST00000308987 TMEM269A0A1B0GVZ9 245 aa4.21□□□□□ -1.74
CKS1B-201ENST00000308987 A0A1W2PNV4 684 aa4.21□□□□□ -1.74
CKS1B-201ENST00000308987 OR2AT4A6NND4 320 aa4.21□□□□□ -1.74
CKS1B-201ENST00000308987 B5MCH6 92 aa4.21□□□□□ -1.74
CKS1B-201ENST00000308987 C11orf98E9PRG8 122 aa4.21□□□□□ -1.74
CKS1B-201ENST00000308987 ICOSLGO75144 302 aa4.21□□□□□ -1.74
CKS1B-201ENST00000308987 RBMXL2O75526 392 aaKnown RBP4.21□□□□□ -1.74
CKS1B-201ENST00000308987 IGLV2-14P01704 120 aa4.21□□□□□ -1.74
CKS1B-201ENST00000308987 IFNA4P05014 189 aa4.21□□□□□ -1.74
CKS1B-201ENST00000308987 H2BFMP0C1H6 154 aa4.21□□□□□ -1.74
CKS1B-201ENST00000308987 RFPL3SP0C7P2 107 aa4.21□□□□□ -1.74
CKS1B-201ENST00000308987 FOLR2P14207 255 aa4.21□□□□□ -1.74
CKS1B-201ENST00000308987 CCL1P22362 96 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms