RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 AP2S1P53680 142 aaPredicted RBP19.17■□□□□ 0.66
PDLIM2-202ENST00000308354 GFRALQ6UXV0 394 aa19.17■□□□□ 0.66
PDLIM2-202ENST00000308354 C17orf78Q8N4C9 275 aa19.17■□□□□ 0.66
PDLIM2-202ENST00000308354 MFFQ9GZY8 342 aa19.17■□□□□ 0.66
PDLIM2-202ENST00000308354 CEACAM8P31997 349 aaPredicted RBP19.17■□□□□ 0.66
PDLIM2-202ENST00000308354 ARPC4P59998 168 aa19.17■□□□□ 0.66
PDLIM2-202ENST00000308354 GNG3P63215 75 aa19.17■□□□□ 0.66
PDLIM2-202ENST00000308354 IKZF1Q13422 519 aa19.17■□□□□ 0.66
PDLIM2-202ENST00000308354 CMSS1Q9BQ75 279 aaKnown RBP19.17■□□□□ 0.66
PDLIM2-202ENST00000308354 PCDHB16Q9NRJ7 776 aa19.17■□□□□ 0.66
PDLIM2-202ENST00000308354 PRR13Q9NZ81 148 aa19.17■□□□□ 0.66
PDLIM2-202ENST00000308354 SLC25A15Q9Y619 301 aa19.17■□□□□ 0.66
PDLIM2-202ENST00000308354 DBX1A6NMT0 343 aa19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 TRAPPC2LH3BP13 241 aa19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 PRRG2O14669 202 aa19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 RHBDL1O75783 438 aa19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 RPA2P15927 270 aa19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 GLRA1P23415 457 aa19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 CALCRP30988 508 aa19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 SLC9A3R2Q15599 337 aa19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 PPP1R1CQ8WVI7 109 aa19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 SCGB3A2Q96PL1 93 aa19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 MICU1Q9BPX6 476 aa19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 RP2O75695 350 aa19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 IGLV1-44P01699 117 aa19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 RAC2P15153 192 aa19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 SUPT4H1P63272 117 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 FGL1Q08830 312 aa19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 CLEC18BQ6UXF7 455 aa19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 WDR86Q86TI4 376 aa19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 ZNF546Q86UE3 836 aa19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 MARS2Q96GW9 593 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 SLX1AQ9BQ83 275 aa19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 ANXA10Q9UJ72 324 aa19.16■□□□□ 0.66
PDLIM2-202ENST00000308354 EEF1E1-BLOC1S5C9J1V9 151 aa19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 H0YL77 283 aa19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 FCGR3AP08637 254 aa19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 SELEP16581 610 aa19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 ZNF83P51522 516 aa19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 MKXQ8IYA7 352 aa19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 COMMD9Q9P000 198 aa19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 IGHV2OR16-5A0A0B4J2B6 119 aa19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 LINC00862A6NCI5 91 aa19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 OR5B21A6NL26 309 aa19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 LEUTXA8MZ59 168 aa19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 PDCD6O75340 191 aa19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 SFT2D2O95562 160 aa19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 FABP6P51161 128 aa19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 EIF2S3LQ2VIR3 472 aaKnown RBP19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 TMEM200AQ86VY9 491 aa19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 ZNF573Q86YE8 665 aa19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 Q8NFD4 153 aa19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 ZNF2Q9BSG1 426 aaPredicted RBP19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 SFXN3Q9BWM7 321 aa19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 OR51I2Q9H344 312 aa19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 ZNF442Q9H7R0 627 aa19.15■□□□□ 0.66
PDLIM2-202ENST00000308354 CHD8Q9HCK8 2581 aa19.14■□□□□ 0.65
PDLIM2-202ENST00000308354 HSPB6O14558 160 aa19.14■□□□□ 0.65
PDLIM2-202ENST00000308354 FGF12P61328 243 aa19.14■□□□□ 0.65
PDLIM2-202ENST00000308354 FAM27E3Q08E93 113 aa19.14■□□□□ 0.65
PDLIM2-202ENST00000308354 CLLU1Q5K131 121 aa19.14■□□□□ 0.65
PDLIM2-202ENST00000308354 SAXO1Q8IYX7 474 aa19.14■□□□□ 0.65
PDLIM2-202ENST00000308354 ADAT1Q9BUB4 502 aaKnown RBP19.14■□□□□ 0.65
PDLIM2-202ENST00000308354 EDARQ9UNE0 448 aa19.14■□□□□ 0.65
PDLIM2-202ENST00000308354 NCOR2Q9Y618 2525 aa19.14■□□□□ 0.65
PDLIM2-202ENST00000308354 SHANK1Q9Y566 2161 aa19.14■□□□□ 0.65
PDLIM2-202ENST00000308354 PRKACAP17612 351 aa19.13■□□□□ 0.65
PDLIM2-202ENST00000308354 FUT3P21217 361 aa19.13■□□□□ 0.65
PDLIM2-202ENST00000308354 SERPINF1P36955 418 aa19.13■□□□□ 0.65
PDLIM2-202ENST00000308354 ELP2Q6IA86 826 aa19.13■□□□□ 0.65
PDLIM2-202ENST00000308354 C11orf87Q6NUJ2 197 aa19.13■□□□□ 0.65
PDLIM2-202ENST00000308354 GSG1LQ6UXU4 331 aa19.13■□□□□ 0.65
PDLIM2-202ENST00000308354 OBP2BQ9NPH6 170 aa19.13■□□□□ 0.65
PDLIM2-202ENST00000308354 RDH8Q9NYR8 311 aa19.13■□□□□ 0.65
PDLIM2-202ENST00000308354 HEATR1Q9H583 2144 aaKnown RBP19.13■□□□□ 0.65
PDLIM2-202ENST00000308354 A0A0G2JNJ9 132 aa19.13■□□□□ 0.65
PDLIM2-202ENST00000308354 C13orf42A0A1B0GVH6 325 aa19.13■□□□□ 0.65
PDLIM2-202ENST00000308354 C5orf51A6NDU8 294 aa19.13■□□□□ 0.65
PDLIM2-202ENST00000308354 ZNF205O95201 554 aa19.13■□□□□ 0.65
PDLIM2-202ENST00000308354 PGAM2P15259 253 aa19.13■□□□□ 0.65
PDLIM2-202ENST00000308354 DTYMKP23919 212 aa19.13■□□□□ 0.65
PDLIM2-202ENST00000308354 ATXN7L3Q14CW9 347 aaPredicted RBP19.13■□□□□ 0.65
PDLIM2-202ENST00000308354 NHLRC3Q5JS37 347 aa19.13■□□□□ 0.65
PDLIM2-202ENST00000308354 GSX2Q9BZM3 304 aa19.13■□□□□ 0.65
PDLIM2-202ENST00000308354 Q9UFV3 132 aa19.13■□□□□ 0.65
PDLIM2-202ENST00000308354 AMDHD2Q9Y303 409 aa19.13■□□□□ 0.65
PDLIM2-202ENST00000308354 IQCF6A8MYZ5 107 aa19.12■□□□□ 0.65
PDLIM2-202ENST00000308354 M0R1B8 84 aa19.12■□□□□ 0.65
PDLIM2-202ENST00000308354 KNG1P01042 644 aa19.12■□□□□ 0.65
PDLIM2-202ENST00000308354 OR5H8P0DN80 308 aa19.12■□□□□ 0.65
PDLIM2-202ENST00000308354 ANKRD55Q3KP44 614 aa19.12■□□□□ 0.65
PDLIM2-202ENST00000308354 TMEM65Q6PI78 240 aa19.12■□□□□ 0.65
PDLIM2-202ENST00000308354 C22orf34Q6ZV56 151 aa19.12■□□□□ 0.65
PDLIM2-202ENST00000308354 RTL8AQ9BWD3 113 aa19.12■□□□□ 0.65
PDLIM2-202ENST00000308354 LIME1Q9H400 295 aa19.12■□□□□ 0.65
PDLIM2-202ENST00000308354 ARID1AO14497 2285 aa19.12■□□□□ 0.65
PDLIM2-202ENST00000308354 RPS2P15880 293 aaKnown RBP19.12■□□□□ 0.65
PDLIM2-202ENST00000308354 RAB14P61106 215 aa19.12■□□□□ 0.65
PDLIM2-202ENST00000308354 SURF2Q15527 256 aaPredicted RBP19.12■□□□□ 0.65
PDLIM2-202ENST00000308354 ZNF660Q6AZW8 331 aaPredicted RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms