RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 LINC01387J3KSC0 135 aa13.07□□□□□ -0.32
CSDC2-201ENST00000306149 NME2P1O60361 137 aa13.07□□□□□ -0.32
CSDC2-201ENST00000306149 EDN3P14138 238 aa13.07□□□□□ -0.32
CSDC2-201ENST00000306149 UCP2P55851 309 aa13.07□□□□□ -0.32
CSDC2-201ENST00000306149 SRYQ05066 204 aa13.07□□□□□ -0.32
CSDC2-201ENST00000306149 LPAL2Q16609 132 aa13.07□□□□□ -0.32
CSDC2-201ENST00000306149 LHFPL2Q6ZUX7 228 aa13.07□□□□□ -0.32
CSDC2-201ENST00000306149 PPP1R32Q7Z5V6 425 aa13.07□□□□□ -0.32
CSDC2-201ENST00000306149 CPEB3Q8NE35 698 aaKnown RBP13.07□□□□□ -0.32
CSDC2-201ENST00000306149 SGCZQ96LD1 299 aa13.07□□□□□ -0.32
CSDC2-201ENST00000306149 ZNF442Q9H7R0 627 aa13.07□□□□□ -0.32
CSDC2-201ENST00000306149 A0A1B0GV50 99 aa13.07□□□□□ -0.32
CSDC2-201ENST00000306149 hCG_38984A0A1B0GV85 526 aa13.07□□□□□ -0.32
CSDC2-201ENST00000306149 TERTO14746 1132 aaKnown RBP13.07□□□□□ -0.32
CSDC2-201ENST00000306149 PHF1O43189 567 aaPredicted RBP13.07□□□□□ -0.32
CSDC2-201ENST00000306149 SEC11BP0C7V7 166 aa13.07□□□□□ -0.32
CSDC2-201ENST00000306149 GDF1P27539 372 aa13.07□□□□□ -0.32
CSDC2-201ENST00000306149 SNCAP37840 140 aa13.07□□□□□ -0.32
CSDC2-201ENST00000306149 SLC25A26Q70HW3 274 aa13.07□□□□□ -0.32
CSDC2-201ENST00000306149 LRTM2Q8N967 370 aa13.07□□□□□ -0.32
CSDC2-201ENST00000306149 SECTM1Q8WVN6 248 aa13.07□□□□□ -0.32
CSDC2-201ENST00000306149 BCO1Q9HAY6 547 aa13.07□□□□□ -0.32
CSDC2-201ENST00000306149 GPR35Q9HC97 309 aa13.07□□□□□ -0.32
CSDC2-201ENST00000306149 A0A096LPE4 126 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 A0A1W2PPZ6 126 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 TSPAN15O95858 294 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 DANCRP0C864 163 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 TCN2P20062 427 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 AADACP22760 399 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 PTAFRP25105 342 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 NHLH2Q02577 135 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 TMEM42Q69YG0 159 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 HS3ST6Q96QI5 342 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 GINS3Q9BRX5 216 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 CRIM1Q9NZV1 1036 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 ZDHHC8Q9ULC8 765 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 SLC7A11Q9UPY5 501 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 PPT1P50897 306 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 ZNF616Q08AN1 781 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 TRIM61Q5EBN2 209 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 SPINK14Q6IE38 97 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 OR2V1Q8NHB1 315 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 C14orf79Q96F83 325 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 SH3BGRL3Q9H299 93 aa13.06□□□□□ -0.32
CSDC2-201ENST00000306149 BORCS7-ASMTA0A0B4J1R7 106 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 C3orf80F5H4A9 247 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 HSPB6O14558 160 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 GPR137BO60478 399 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 DAZAP2Q15038 168 aaPredicted RBP13.05□□□□□ -0.32
CSDC2-201ENST00000306149 RNF212Q495C1 297 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 MIDNQ504T8 468 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 ACER2Q5QJU3 275 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 ASCL4Q6XD76 172 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 ZNF611Q8N823 705 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 HIST1H2BAQ96A08 127 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 ADGRG7Q96K78 797 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 TP53RKQ96S44 253 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 CLCC1Q96S66 551 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 SCRT1Q9BWW7 348 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 SUCNR1Q9BXA5 334 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 RFNGQ9Y644 331 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 H7C1Q1 480 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 P2RY1P47900 373 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 FUT6P51993 359 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 FOXG1P55316 489 aaPredicted RBP13.05□□□□□ -0.32
CSDC2-201ENST00000306149 MALLQ13021 153 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 GPR157Q5UAW9 335 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 FBXW12Q6X9E4 464 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 LIAT1Q6ZQX7 453 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 SUMF1Q8NBK3 374 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 HSD17B11Q8NBQ5 300 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 MSI2Q96DH6 328 aaKnown RBP13.05□□□□□ -0.32
CSDC2-201ENST00000306149 C18orf12Q96KH6 178 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 ZNF286AQ9HBT8 521 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 LUZP4Q9P127 313 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 TCFL5Q9UL49 500 aa13.05□□□□□ -0.32
CSDC2-201ENST00000306149 SLC33A1O00400 549 aaPredicted RBP13.04□□□□□ -0.32
CSDC2-201ENST00000306149 PDCD6O75340 191 aa13.04□□□□□ -0.32
CSDC2-201ENST00000306149 KCNE4Q8WWG9 221 aa13.04□□□□□ -0.32
CSDC2-201ENST00000306149 IL36RNQ9UBH0 155 aa13.04□□□□□ -0.32
CSDC2-201ENST00000306149 C1orf196B1AJZ1 125 aa13.04□□□□□ -0.32
CSDC2-201ENST00000306149 EIF3GO75821 320 aaKnown RBP eCLIP13.04□□□□□ -0.32
CSDC2-201ENST00000306149 RBM11P57052 281 aaKnown RBP13.04□□□□□ -0.32
CSDC2-201ENST00000306149 TIPARPQ7Z3E1 657 aaKnown RBP13.04□□□□□ -0.32
CSDC2-201ENST00000306149 TUBA4BQ9H853 241 aa13.04□□□□□ -0.32
CSDC2-201ENST00000306149 CELA3AP09093 270 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 DUSP1P28562 367 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 GUK1Q16774 197 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 KRTAP27-1Q3LI81 207 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 AWAT1Q58HT5 328 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 SLC35G3Q8N808 338 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 RPS10P5Q9NQ39 176 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 ZNF816-ZNF321PA0A0X1KG74 233 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 PRSS44E7EML9 344 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 DNPH1O43598 174 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 MT-ND4LP03901 98 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 MMP7P09237 267 aaPredicted RBP13.03□□□□□ -0.32
CSDC2-201ENST00000306149 LMO1P25800 156 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 RAB5CP51148 216 aa13.03□□□□□ -0.32
CSDC2-201ENST00000306149 HERV-K104P61576 105 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms