RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 CAPGP40121 348 aa21.51■■□□□ 1.03
CDKN2A-201ENST00000304494 BMXP51813 675 aa21.51■■□□□ 1.03
CDKN2A-201ENST00000304494 AANATQ16613 207 aa21.51■■□□□ 1.03
CDKN2A-201ENST00000304494 RNF144BQ7Z419 303 aa21.51■■□□□ 1.03
CDKN2A-201ENST00000304494 C8orf59Q8N0T1 100 aaPredicted RBP21.51■■□□□ 1.03
CDKN2A-201ENST00000304494 OR4S1Q8NGB4 309 aa21.51■■□□□ 1.03
CDKN2A-201ENST00000304494 C17orf50Q8WW18 174 aa21.51■■□□□ 1.03
CDKN2A-201ENST00000304494 SSX3Q99909 188 aa21.51■■□□□ 1.03
CDKN2A-201ENST00000304494 VCXQ9H320 206 aa21.51■■□□□ 1.03
CDKN2A-201ENST00000304494 H3BUX3 64 aa21.5■■□□□ 1.03
CDKN2A-201ENST00000304494 SIRPB1O00241 398 aa21.5■■□□□ 1.03
CDKN2A-201ENST00000304494 OR2H2O95918 312 aa21.5■■□□□ 1.03
CDKN2A-201ENST00000304494 IGHV1-8P0DP01 117 aa21.5■■□□□ 1.03
CDKN2A-201ENST00000304494 ERP29P30040 261 aaKnown RBP21.5■■□□□ 1.03
CDKN2A-201ENST00000304494 TGFBR2P37173 567 aa21.5■■□□□ 1.03
CDKN2A-201ENST00000304494 SOX2P48431 317 aa21.5■■□□□ 1.03
CDKN2A-201ENST00000304494 ZP1P60852 638 aa21.5■■□□□ 1.03
CDKN2A-201ENST00000304494 LRRC75BQ2VPJ9 315 aa21.5■■□□□ 1.03
CDKN2A-201ENST00000304494 XAF1Q6GPH4 301 aa21.5■■□□□ 1.03
CDKN2A-201ENST00000304494 ZNF529Q6P280 563 aa21.5■■□□□ 1.03
CDKN2A-201ENST00000304494 CRIP3Q6Q6R5 217 aa21.5■■□□□ 1.03
CDKN2A-201ENST00000304494 OR52N1Q8NH53 320 aa21.5■■□□□ 1.03
CDKN2A-201ENST00000304494 WFDC12Q8WWY7 111 aa21.5■■□□□ 1.03
CDKN2A-201ENST00000304494 RGP1Q92546 391 aaPredicted RBP21.5■■□□□ 1.03
CDKN2A-201ENST00000304494 AJUBAQ96IF1 538 aa21.5■■□□□ 1.03
CDKN2A-201ENST00000304494 ZNF696Q9H7X3 374 aa21.5■■□□□ 1.03
CDKN2A-201ENST00000304494 MEX3AA1L020 520 aaKnown RBP21.49■■□□□ 1.03
CDKN2A-201ENST00000304494 FUOMA2VDF0 154 aa21.49■■□□□ 1.03
CDKN2A-201ENST00000304494 LMO1P25800 156 aa21.49■■□□□ 1.03
CDKN2A-201ENST00000304494 OR3A1P47881 315 aa21.49■■□□□ 1.03
CDKN2A-201ENST00000304494 PRR31Q5SQ13 230 aa21.49■■□□□ 1.03
CDKN2A-201ENST00000304494 TCF23Q7RTU1 214 aa21.49■■□□□ 1.03
CDKN2A-201ENST00000304494 TPRX1Q8N7U7 411 aa21.49■■□□□ 1.03
CDKN2A-201ENST00000304494 CHST4Q8NCG5 386 aa21.49■■□□□ 1.03
CDKN2A-201ENST00000304494 SMIM19Q96E16 107 aa21.49■■□□□ 1.03
CDKN2A-201ENST00000304494 GPER1Q99527 375 aa21.49■■□□□ 1.03
CDKN2A-201ENST00000304494 EFCAB10A6NFE3 127 aa21.48■■□□□ 1.03
CDKN2A-201ENST00000304494 OGG1O15527 345 aa21.48■■□□□ 1.03
CDKN2A-201ENST00000304494 ZNF44P15621 663 aa21.48■■□□□ 1.03
CDKN2A-201ENST00000304494 P2RX3P56373 397 aa21.48■■□□□ 1.03
CDKN2A-201ENST00000304494 PXT1Q8NFP0 134 aa21.48■■□□□ 1.03
CDKN2A-201ENST00000304494 LINC01006Q8NI28 216 aa21.48■■□□□ 1.03
CDKN2A-201ENST00000304494 TMEM106AQ96A25 262 aa21.48■■□□□ 1.03
CDKN2A-201ENST00000304494 TAS2R4Q9NYW5 299 aa21.48■■□□□ 1.03
CDKN2A-201ENST00000304494 CNOT2Q9NZN8 540 aaKnown RBP21.48■■□□□ 1.03
CDKN2A-201ENST00000304494 ZNF281Q9Y2X9 895 aa21.48■■□□□ 1.03
CDKN2A-201ENST00000304494 UBE2J1Q9Y385 318 aaPredicted RBP21.48■■□□□ 1.03
CDKN2A-201ENST00000304494 TBL2Q9Y4P3 447 aaKnown RBP21.48■■□□□ 1.03
CDKN2A-201ENST00000304494 RNF114Q9Y508 228 aa21.48■■□□□ 1.03
CDKN2A-201ENST00000304494 ANKRD65E5RJM6 399 aa21.47■■□□□ 1.03
CDKN2A-201ENST00000304494 ARG1P05089 322 aa21.47■■□□□ 1.03
CDKN2A-201ENST00000304494 MTNR1BP49286 362 aa21.47■■□□□ 1.03
CDKN2A-201ENST00000304494 SCN1BQ07699 218 aa21.47■■□□□ 1.03
CDKN2A-201ENST00000304494 ST3GAL4Q11206 333 aa21.47■■□□□ 1.03
CDKN2A-201ENST00000304494 TRAPPC6BQ86SZ2 158 aa21.47■■□□□ 1.03
CDKN2A-201ENST00000304494 SATL1Q86VE3 508 aa21.47■■□□□ 1.03
CDKN2A-201ENST00000304494 OR11H6Q8NGC7 330 aa21.47■■□□□ 1.03
CDKN2A-201ENST00000304494 GGHQ92820 318 aa21.47■■□□□ 1.03
CDKN2A-201ENST00000304494 FOXRED1Q96CU9 486 aaPredicted RBP21.47■■□□□ 1.03
CDKN2A-201ENST00000304494 C16orf95Q9H693 158 aa21.47■■□□□ 1.03
CDKN2A-201ENST00000304494 DCLRE1BQ9H816 532 aa21.47■■□□□ 1.03
CDKN2A-201ENST00000304494 CLEC2DQ9UHP7 191 aa21.47■■□□□ 1.03
CDKN2A-201ENST00000304494 A0A0G2JK05 382 aa21.46■■□□□ 1.03
CDKN2A-201ENST00000304494 FAM90A8PA6NJQ4 464 aa21.46■■□□□ 1.03
CDKN2A-201ENST00000304494 GNAO1P09471 354 aa21.46■■□□□ 1.03
CDKN2A-201ENST00000304494 PPP3R1P63098 170 aa21.46■■□□□ 1.03
CDKN2A-201ENST00000304494 ZNF626Q68DY1 528 aa21.46■■□□□ 1.03
CDKN2A-201ENST00000304494 ELP2Q6IA86 826 aa21.46■■□□□ 1.03
CDKN2A-201ENST00000304494 Q6ZSV7 163 aa21.46■■□□□ 1.03
CDKN2A-201ENST00000304494 PPA2Q9H2U2 334 aa21.46■■□□□ 1.03
CDKN2A-201ENST00000304494 SIRT4Q9Y6E7 314 aaPredicted RBP21.46■■□□□ 1.03
CDKN2A-201ENST00000304494 SESN1Q9Y6P5 492 aa21.46■■□□□ 1.03
CDKN2A-201ENST00000304494 NBEAL1Q6ZS30 2694 aa21.45■■□□□ 1.02
CDKN2A-201ENST00000304494 TRGV10A0A0A0MS01 117 aa21.45■■□□□ 1.02
CDKN2A-201ENST00000304494 ODF3BA8MYP8 253 aa21.45■■□□□ 1.02
CDKN2A-201ENST00000304494 GABRPO00591 440 aa21.45■■□□□ 1.02
CDKN2A-201ENST00000304494 DEGS1O15121 323 aa21.45■■□□□ 1.02
CDKN2A-201ENST00000304494 TSPAN9O75954 239 aa21.45■■□□□ 1.02
CDKN2A-201ENST00000304494 CLPXO76031 633 aa21.45■■□□□ 1.02
CDKN2A-201ENST00000304494 ALDOBP05062 364 aa21.45■■□□□ 1.02
CDKN2A-201ENST00000304494 CSN2P05814 226 aa21.45■■□□□ 1.02
CDKN2A-201ENST00000304494 ASPHD2Q6ICH7 369 aa21.45■■□□□ 1.02
CDKN2A-201ENST00000304494 OR51A2Q8NGJ7 313 aa21.45■■□□□ 1.02
CDKN2A-201ENST00000304494 TNFAIP8L1Q8WVP5 186 aa21.45■■□□□ 1.02
CDKN2A-201ENST00000304494 MALSU1Q96EH3 234 aa21.45■■□□□ 1.02
CDKN2A-201ENST00000304494 GAL3ST2Q9H3Q3 398 aa21.45■■□□□ 1.02
CDKN2A-201ENST00000304494 RAB18Q9NP72 206 aa21.45■■□□□ 1.02
CDKN2A-201ENST00000304494 TMEM138Q9NPI0 162 aa21.45■■□□□ 1.02
CDKN2A-201ENST00000304494 DYNC1I2Q13409 638 aaKnown RBP21.44■■□□□ 1.02
CDKN2A-201ENST00000304494 DMKNQ6E0U4 476 aaPredicted RBP21.44■■□□□ 1.02
CDKN2A-201ENST00000304494 Q6P435 159 aa21.44■■□□□ 1.02
CDKN2A-201ENST00000304494 BRICD5Q6PL45 260 aa21.44■■□□□ 1.02
CDKN2A-201ENST00000304494 LIAT1Q6ZQX7 453 aa21.44■■□□□ 1.02
CDKN2A-201ENST00000304494 LHFPL4Q7Z7J7 247 aa21.44■■□□□ 1.02
CDKN2A-201ENST00000304494 FBLIM1Q8WUP2 373 aa21.44■■□□□ 1.02
CDKN2A-201ENST00000304494 GHSRQ92847 366 aa21.44■■□□□ 1.02
CDKN2A-201ENST00000304494 FAM192AQ9GZU8 254 aa21.44■■□□□ 1.02
CDKN2A-201ENST00000304494 PLCXD1Q9NUJ7 323 aa21.44■■□□□ 1.02
CDKN2A-201ENST00000304494 VGLL3A8MV65 326 aa21.43■■□□□ 1.02
CDKN2A-201ENST00000304494 SLC33A1O00400 549 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms