RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 RNF4P78317 190 aa12.04□□□□□ -0.48
KARS-201ENST00000302445 FOXF1Q12946 379 aa12.04□□□□□ -0.48
KARS-201ENST00000302445 USF2Q15853 346 aaPredicted RBP12.04□□□□□ -0.48
KARS-201ENST00000302445 SLC25A53Q5H9E4 307 aa12.04□□□□□ -0.48
KARS-201ENST00000302445 ZNF664Q8N3J9 261 aa12.04□□□□□ -0.48
KARS-201ENST00000302445 METTL27Q8N6F8 245 aaPredicted RBP12.04□□□□□ -0.48
KARS-201ENST00000302445 C12orf76Q8N812 135 aaPredicted RBP12.04□□□□□ -0.48
KARS-201ENST00000302445 DNASE2BQ8WZ79 361 aa12.04□□□□□ -0.48
KARS-201ENST00000302445 TSLPQ969D9 159 aa12.04□□□□□ -0.48
KARS-201ENST00000302445 R3HDM4Q96D70 268 aa12.04□□□□□ -0.48
KARS-201ENST00000302445 ZNF286AQ9HBT8 521 aa12.04□□□□□ -0.48
KARS-201ENST00000302445 CRLF2Q9HC73 371 aa12.04□□□□□ -0.48
KARS-201ENST00000302445 SDF2L1Q9HCN8 221 aa12.04□□□□□ -0.48
KARS-201ENST00000302445 MSTNO14793 375 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 PHF1O43189 567 aaPredicted RBP12.03□□□□□ -0.48
KARS-201ENST00000302445 VAMP2P63027 116 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 HIST3H3Q16695 136 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 OR5D18Q8NGL1 313 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 TMEM171Q8WVE6 324 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 CYYR1Q96J86 154 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 ADGRG7Q96K78 797 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 SNX22Q96L94 193 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 CABLES2Q9BTV7 478 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 TMEM222Q9H0R3 208 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 P4HTMQ9NXG6 502 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 C10orf142B7Z368 130 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 TK1P04183 234 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 PGA5P0DJD9 388 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 BCL2P10415 239 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 PNLIPP16233 465 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 FUT3P21217 361 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 CEBPGP53567 150 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 EXT1Q16394 746 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 C9orf50Q5SZB4 431 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.03□□□□□ -0.48
KARS-201ENST00000302445 OR5L1Q8NGL2 311 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 OR5C1Q8NGR4 320 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 LYZL4Q96KX0 146 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 ATP5SQ99766 215 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 AGMATQ9BSE5 352 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 ABHD14AQ9BUJ0 271 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 NXT1Q9UKK6 140 aaKnown RBP12.03□□□□□ -0.48
KARS-201ENST00000302445 SLC7A11Q9UPY5 501 aa12.03□□□□□ -0.48
KARS-201ENST00000302445 C3orf85A0A1B0GTC6 90 aa12.02□□□□□ -0.49
KARS-201ENST00000302445 MED19A0JLT2 244 aaPredicted RBP12.02□□□□□ -0.49
KARS-201ENST00000302445 LILRA5A6NI73 299 aa12.02□□□□□ -0.49
KARS-201ENST00000302445 PPP5D1E7EU14 171 aa12.02□□□□□ -0.49
KARS-201ENST00000302445 SEMA4FO95754 770 aa12.02□□□□□ -0.49
KARS-201ENST00000302445 QDPRP09417 244 aa12.02□□□□□ -0.49
KARS-201ENST00000302445 CTSEP14091 401 aa12.02□□□□□ -0.49
KARS-201ENST00000302445 CCKARP32238 428 aa12.02□□□□□ -0.49
KARS-201ENST00000302445 HERV-K104P61576 105 aa12.02□□□□□ -0.49
KARS-201ENST00000302445 ASCL4Q6XD76 172 aa12.02□□□□□ -0.49
KARS-201ENST00000302445 MAML2Q8IZL2 1156 aaPredicted RBP12.02□□□□□ -0.49
KARS-201ENST00000302445 SLC22A18ASQ8N1D0 253 aa12.02□□□□□ -0.49
KARS-201ENST00000302445 OR13H1Q8NG92 308 aa12.02□□□□□ -0.49
KARS-201ENST00000302445 OR4X1Q8NH49 305 aa12.02□□□□□ -0.49
KARS-201ENST00000302445 MRGPRX4Q96LA9 322 aa12.02□□□□□ -0.49
KARS-201ENST00000302445 EMC6Q9BV81 110 aa12.02□□□□□ -0.49
KARS-201ENST00000302445 LOC102725191A0A1B0GVB3 256 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 PROB1E7EW31 1015 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 RER1O15258 196 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 TRAF3IP2O43734 574 aaPredicted RBP12.01□□□□□ -0.49
KARS-201ENST00000302445 PIAS2O75928 621 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 UCP1P25874 307 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 MSX1P28360 303 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 FASLGP48023 281 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 TNFRSF9Q07011 255 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 SMAD4Q13485 552 aaKnown RBP12.01□□□□□ -0.49
KARS-201ENST00000302445 PHLDA2Q53GA4 152 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 SFTPA2Q8IWL1 248 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 MBD3L1Q8WWY6 194 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 GAS2L1Q99501 681 aaPredicted RBP12.01□□□□□ -0.49
KARS-201ENST00000302445 HDHD3Q9BSH5 251 aaPredicted RBP12.01□□□□□ -0.49
KARS-201ENST00000302445 PLA2G2FQ9BZM2 168 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 GPR27Q9NS67 375 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 WASF3Q9UPY6 502 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 MPPED1O15442 326 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 OTX1P32242 354 aaPredicted RBP12.01□□□□□ -0.49
KARS-201ENST00000302445 BLKP51451 505 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 DYNLT3P51808 116 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 ID3Q02535 119 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 ZFP36L1Q07352 338 aaKnown RBP12.01□□□□□ -0.49
KARS-201ENST00000302445 RAB35Q15286 201 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 IQCJQ1A5X6 159 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 CENPVQ7Z7K6 275 aaPredicted RBP12.01□□□□□ -0.49
KARS-201ENST00000302445 IL22RA1Q8N6P7 574 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 OR2V1Q8NHB1 315 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 RNF138Q8WVD3 245 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 IL22RA2Q969J5 263 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 REEP6Q96HR9 211 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 CALHM2Q9HA72 323 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 ELL3Q9HB65 397 aaPredicted RBP12.01□□□□□ -0.49
KARS-201ENST00000302445 GLRX2Q9NS18 164 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 IL36GQ9NZH8 169 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 OR14J1Q9UGF5 321 aa12.01□□□□□ -0.49
KARS-201ENST00000302445 NKX2-6A6NCS4 301 aa12□□□□□ -0.49
KARS-201ENST00000302445 IFNA1P01562 189 aa12□□□□□ -0.49
KARS-201ENST00000302445 CELA2BP08218 269 aaPredicted RBP12□□□□□ -0.49
KARS-201ENST00000302445 FAM3BP58499 235 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms