RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 PSMB3P49720 205 aa13□□□□□ -0.33
CDH23-202ENST00000299366 MMP16P51512 607 aa13□□□□□ -0.33
CDH23-202ENST00000299366 NHLH2Q02577 135 aa13□□□□□ -0.33
CDH23-202ENST00000299366 PRSS54Q6PEW0 395 aa13□□□□□ -0.33
CDH23-202ENST00000299366 RBMS3Q6XE24 437 aaKnown RBP13□□□□□ -0.33
CDH23-202ENST00000299366 IL34Q6ZMJ4 242 aa13□□□□□ -0.33
CDH23-202ENST00000299366 TPRX1Q8N7U7 411 aa13□□□□□ -0.33
CDH23-202ENST00000299366 SMIM10Q96HG1 83 aa13□□□□□ -0.33
CDH23-202ENST00000299366 ADGRG7Q96K78 797 aa13□□□□□ -0.33
CDH23-202ENST00000299366 CST4P01036 141 aa13□□□□□ -0.33
CDH23-202ENST00000299366 FUT6P51993 359 aa13□□□□□ -0.33
CDH23-202ENST00000299366 RUNX1Q01196 453 aa13□□□□□ -0.33
CDH23-202ENST00000299366 TUSC5Q8IXB3 177 aa13□□□□□ -0.33
CDH23-202ENST00000299366 FER1L6-AS2Q96M78 137 aa13□□□□□ -0.33
CDH23-202ENST00000299366 CACNG5Q9UF02 275 aa13□□□□□ -0.33
CDH23-202ENST00000299366 LIPGQ9Y5X9 500 aa13□□□□□ -0.33
CDH23-202ENST00000299366 WSB1Q9Y6I7 421 aa13□□□□□ -0.33
CDH23-202ENST00000299366 A0A1W2PPE2 198 aa13□□□□□ -0.33
CDH23-202ENST00000299366 PPP5D1E7EU14 171 aa13□□□□□ -0.33
CDH23-202ENST00000299366 SUMO3P55854 103 aaPredicted RBP13□□□□□ -0.33
CDH23-202ENST00000299366 DRAM2Q6UX65 266 aa13□□□□□ -0.33
CDH23-202ENST00000299366 KMT5CQ86Y97 462 aa13□□□□□ -0.33
CDH23-202ENST00000299366 D2HGDHQ8N465 521 aa13□□□□□ -0.33
CDH23-202ENST00000299366 DOCK11Q5JSL3 2073 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 A0A0J9YW62 118 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 DFFBO76075 338 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 TOX4O94842 621 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 SLC25A4P12235 298 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 EFNB1P98172 346 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 OVCH2Q7RTZ1 564 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 SLC17A5Q9NRA2 495 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 V9GYS6 101 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 KLF4O43474 513 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 PDGFBP01127 241 aaPredicted RBP12.99□□□□□ -0.33
CDH23-202ENST00000299366 GABRA4P48169 554 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 SLC25A42Q86VD7 318 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 OR2C3Q8N628 320 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 PRO1933Q9H354 126 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 SLC25A22Q9H936 323 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 CCL28Q9NRJ3 127 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 C3orf80F5H4A9 247 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 SPINT2O43291 252 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 MT-ND4LP03901 98 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 GP1BAP07359 652 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 SSBP1Q04837 148 aaKnown RBP12.99□□□□□ -0.33
CDH23-202ENST00000299366 TGIF1Q15583 401 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 ZNF501Q96CX3 271 aaPredicted RBP12.99□□□□□ -0.33
CDH23-202ENST00000299366 RTL8AQ9BWD3 113 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 RAB18Q9NP72 206 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 RASL12Q9NYN1 266 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 FAM208BQ5VWN6 2430 aa12.99□□□□□ -0.33
CDH23-202ENST00000299366 IGHV5-10-1A0A0J9YXX1 117 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 TERTO14746 1132 aaKnown RBP12.98□□□□□ -0.33
CDH23-202ENST00000299366 PDCD6O75340 191 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 CRYBA1P05813 215 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 CALCRP30988 508 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 BTNL3Q6UXE8 466 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 BAGE3Q86Y29 109 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 BAGE2Q86Y30 109 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 ZNF573Q86YE8 665 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 OR6X1Q8NH79 312 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 NPDC1Q9NQX5 325 aaPredicted RBP12.98□□□□□ -0.33
CDH23-202ENST00000299366 SLC2A9Q9NRM0 540 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 GPR27Q9NS67 375 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 PRRC2CQ9Y520 2896 aaKnown RBP12.98□□□□□ -0.33
CDH23-202ENST00000299366 MT-CO2P00403 227 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 HEXAP06865 529 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 FHITP49789 147 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 RAC1P63000 192 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 PNLIPRP3Q17RR3 467 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 AWAT1Q58HT5 328 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 ZNF705AQ6ZN79 300 aaPredicted RBP12.98□□□□□ -0.33
CDH23-202ENST00000299366 TMEM178AQ8NBL3 297 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 CADM4Q8NFZ8 388 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 OR10D4PQ8NGN7 298 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 NDRG3Q9UGV2 375 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 WDR90Q96KV7 1748 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 SLC22A20A6NK97 555 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 ABCD4O14678 606 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 CEACAM6P40199 344 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 MEOX2P50222 304 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 ZNF154Q13106 437 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 MPV17LQ2QL34 196 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 HES3Q5TGS1 186 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 SPSB1Q96BD6 273 aa12.98□□□□□ -0.33
CDH23-202ENST00000299366 IGLV1-36A0A0B4J1U3 117 aa12.97□□□□□ -0.33
CDH23-202ENST00000299366 CDIPTO14735 213 aa12.97□□□□□ -0.33
CDH23-202ENST00000299366 SPRY3O43610 288 aa12.97□□□□□ -0.33
CDH23-202ENST00000299366 CYTIPO60759 359 aa12.97□□□□□ -0.33
CDH23-202ENST00000299366 RPS11P62280 158 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDH23-202ENST00000299366 DEFB109BQ30KR1 87 aa12.97□□□□□ -0.33
CDH23-202ENST00000299366 OR10P1Q8NGE3 313 aa12.97□□□□□ -0.33
CDH23-202ENST00000299366 SAT2Q96F10 170 aaPredicted RBP12.97□□□□□ -0.33
CDH23-202ENST00000299366 NAA60Q9H7X0 242 aa12.97□□□□□ -0.33
CDH23-202ENST00000299366 NOTCH4Q99466 2003 aa12.97□□□□□ -0.33
CDH23-202ENST00000299366 C3orf85A0A1B0GTC6 90 aa12.97□□□□□ -0.33
CDH23-202ENST00000299366 MDFIC2A0A1B0GVS7 189 aa12.97□□□□□ -0.33
CDH23-202ENST00000299366 NKX2-6A6NCS4 301 aa12.97□□□□□ -0.33
CDH23-202ENST00000299366 MS4A18H0YCH9 400 aa12.97□□□□□ -0.33
CDH23-202ENST00000299366 SH2D1BO14796 132 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms