RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 LYZL2Q7Z4W2 148 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 HOGA1Q86XE5 327 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 SLC30A7Q8NEW0 376 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 SPOCK3Q9BQ16 436 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 OR2J1Q9GZK6 312 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 NECAP2Q9NVZ3 263 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 TREM2Q9NZC2 230 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 GPR132Q9UNW8 380 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 MEMO1Q9Y316 297 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 INTS1Q8N201 2190 aaKnown RBP8.03□□□□□ -1.12
PRDM9-201ENST00000296682 CHD8Q9HCK8 2581 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 MSGN1A6NI15 193 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 CEACAM18A8MTB9 384 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 H3BP45 60 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 CDIPTO14735 213 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 SFT2D2O95562 160 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 KRTAP27-1Q3LI81 207 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 CLLU1Q5K131 121 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 ZDHHC22Q8N966 263 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 PXT1Q8NFP0 134 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 OR1J1Q8NGS3 322 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 OR1S1Q8NH92 325 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 MRGPRFQ96AM1 343 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 ZNF175Q9Y473 711 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 ZNF318Q5VUA4 2279 aa8.03□□□□□ -1.12
PRDM9-201ENST00000296682 A0A0D9SG52 128 aa8.02□□□□□ -1.12
PRDM9-201ENST00000296682 KLK10O43240 276 aa8.02□□□□□ -1.12
PRDM9-201ENST00000296682 NXPH2O95156 264 aa8.02□□□□□ -1.12
PRDM9-201ENST00000296682 SLC34A2O95436 690 aa8.02□□□□□ -1.12
PRDM9-201ENST00000296682 TK1P04183 234 aa8.02□□□□□ -1.12
PRDM9-201ENST00000296682 NMBP08949 121 aa8.02□□□□□ -1.12
PRDM9-201ENST00000296682 SCTP09683 121 aa8.02□□□□□ -1.12
PRDM9-201ENST00000296682 RCC1P18754 421 aaPredicted RBP8.02□□□□□ -1.12
PRDM9-201ENST00000296682 FUT3P21217 361 aa8.02□□□□□ -1.12
PRDM9-201ENST00000296682 TGFBR3Q03167 851 aa8.02□□□□□ -1.12
PRDM9-201ENST00000296682 TUSC1Q2TAM9 212 aa8.02□□□□□ -1.12
PRDM9-201ENST00000296682 ZNF695Q8IW36 515 aa8.02□□□□□ -1.12
PRDM9-201ENST00000296682 MSL2Q9HCI7 577 aa8.02□□□□□ -1.12
PRDM9-201ENST00000296682 TINAGQ9UJW2 476 aa8.02□□□□□ -1.12
PRDM9-201ENST00000296682 K7EPK0 472 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 RHBDL1O75783 438 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 CRHP06850 196 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 ZNF806P0C7X5 589 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 HOXD11P31277 338 aaPredicted RBP8.02□□□□□ -1.13
PRDM9-201ENST00000296682 CEBPDP49716 269 aaPredicted RBP8.02□□□□□ -1.13
PRDM9-201ENST00000296682 SNTB1Q13884 538 aaKnown RBP8.02□□□□□ -1.13
PRDM9-201ENST00000296682 PNLIPRP3Q17RR3 467 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 IZUMO4Q1ZYL8 232 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 ZNF826PQ6ZT77 177 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 FAM71E2Q8N5Q1 922 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 TPRX1Q8N7U7 411 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 RFESDQ8TAC1 157 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 APOBEC3DQ96AK3 386 aaPredicted RBP8.02□□□□□ -1.13
PRDM9-201ENST00000296682 MARS2Q96GW9 593 aaKnown RBP8.02□□□□□ -1.13
PRDM9-201ENST00000296682 TRAPPC2LQ9UL33 140 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 ANKRD11Q6UB99 2663 aaPredicted RBP8.02□□□□□ -1.13
PRDM9-201ENST00000296682 WDR1O75083 606 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 AADACP22760 399 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 CRYGSP22914 178 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 PTGER4P35408 488 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 ALDH3B1P43353 468 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 CYCSP99999 105 aaKnown RBP8.02□□□□□ -1.13
PRDM9-201ENST00000296682 ZNF528Q3MIS6 628 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 SMUG1Q53HV7 270 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 ACTBL2Q562R1 376 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 TMEM268Q5VZI3 342 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 NSUN5P2Q63ZY6 315 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 SIGIRRQ6IA17 410 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 OR2A2Q6IF42 318 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 C12orf4Q9NQ89 552 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 PCDHB16Q9NRJ7 776 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 GHRLQ9UBU3 117 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 PPP1R3CQ9UQK1 317 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 V9GYS6 101 aa8.02□□□□□ -1.13
PRDM9-201ENST00000296682 ABCA1O95477 2261 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 FOXI3A8MTJ6 420 aaPredicted RBP8.01□□□□□ -1.13
PRDM9-201ENST00000296682 PDCD6O75340 191 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 FPR2P25090 351 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 RPS16P62249 146 aaKnown RBP8.01□□□□□ -1.13
PRDM9-201ENST00000296682 EDDM3AQ14507 147 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 ARL6IP1Q15041 203 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 PAN3Q58A45 887 aaKnown RBP8.01□□□□□ -1.13
PRDM9-201ENST00000296682 GGNBP1Q5YKI7 109 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 STPG2Q8N412 459 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 TMEM230Q96A57 120 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 Q96M66 194 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 RTBDNQ9BSG5 229 aaPredicted RBP8.01□□□□□ -1.13
PRDM9-201ENST00000296682 C1orf123Q9NWV4 160 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 PRELID1Q9Y255 219 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 RPS10-NUDT3A0A1W2PQS6 291 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 DEGS1O15121 323 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 FCGR3AP08637 254 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 MRPL49Q13405 166 aaKnown RBP8.01□□□□□ -1.13
PRDM9-201ENST00000296682 RPL7L1Q6DKI1 246 aaKnown RBP8.01□□□□□ -1.13
PRDM9-201ENST00000296682 CRIP3Q6Q6R5 217 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 ADGRG7Q96K78 797 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 FAM234AQ9H0X4 552 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 PARD6AQ9NPB6 346 aa8.01□□□□□ -1.13
PRDM9-201ENST00000296682 ZNF71Q9NQZ8 489 aaPredicted RBP8.01□□□□□ -1.13
PRDM9-201ENST00000296682 DCHS1Q96JQ0 3298 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms