RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 DUSP13Q9UII6 198 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 NEU3Q9UQ49 428 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 TMEM265A0A087WTH1 108 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 HCRTR1O43613 425 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 ID4P47928 161 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 IFITM3Q01628 133 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 KLF9Q13886 244 aaPredicted RBP10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 TAZQ16635 292 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 C14orf144Q96I85 54 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 FAM206AQ9NX38 181 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 RCC2Q9P258 522 aaKnown RBP10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 KIAA1456Q9P272 454 aa10.51□□□□□ -0.73
SHROOM3-201ENST00000296043 RECKO95980 971 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 ZBTB25P24278 435 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 NUDT10Q8NFP7 164 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 ZNF707Q96C28 371 aaPredicted RBP10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 MRPL16Q9NX20 251 aaKnown RBP10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 VSIG4Q9Y279 399 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 C5P01031 1676 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 A0A0G2JLL6 359 aaPredicted RBP10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 GSTZ1O43708 216 aaPredicted RBP10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 PRRT2Q7Z6L0 340 aaPredicted RBP10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 HIST1H2BAQ96A08 127 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 RTL8AQ9BWD3 113 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 CHRNA10Q9GZZ6 450 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 EPHX3Q9H6B9 360 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 MMP17Q9ULZ9 603 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 PAGE4O60829 102 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 BCL2P10415 239 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 FGF9P31371 208 aaPredicted RBP10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 FAM110CQ1W6H9 321 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 A0A1B0GWB2 263 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 IGSF23A1L1A6 192 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 SCD5Q86SK9 330 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 C17orf47Q8NEP4 570 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 MIXL1Q9H2W2 232 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 MBNL1Q9NR56 388 aaKnown RBP10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 NPTNQ9Y639 398 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 MPTX1A8MV57 137 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 HYAL3O43820 417 aaPredicted RBP10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 AGERQ15109 404 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 COL1A1P02452 1464 aaPredicted RBP10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 OR1K1Q8NGR3 316 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 C3orf85A0A1B0GTC6 90 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 GAB4Q2WGN9 574 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 HES3Q5TGS1 186 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 TMEM183AQ8IXX5 376 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 ANKRD20A5PA0PJZ0 165 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 FIGNL2A6NMB9 653 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 M0R135 149 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 TCTN3Q6NUS6 607 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 ZNF799Q96GE5 643 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 SLC7A10Q9NS82 523 aa10.5□□□□□ -0.73
SHROOM3-201ENST00000296043 IDSB3KWA1 339 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 RPS15P62841 145 aaKnown RBP10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 CTBSQ01459 385 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 PRDX1Q06830 199 aaKnown RBP10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 TBC1D28Q2M2D7 210 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 Q7L0L9 218 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 OR4D9Q8NGE8 314 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 WNT10AQ9GZT5 417 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 A0A096LPE4 126 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 A0A1W2PPZ6 126 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 PRSS37A4D1T9 235 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 SLC35E2P0CK97 266 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 ARR3P36575 388 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 CCSMST1Q4G0I0 132 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 TM4SF20Q53R12 229 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 FIZ1Q96SL8 496 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 TLNRD1Q9H1K6 362 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 LRP12Q9Y561 859 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 KDM3BQ7LBC6 1761 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 PLPP1O14494 284 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 TIMP1P01033 207 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 CA6P23280 308 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 LPAR6P43657 344 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 OR4C13Q8NGP0 309 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 DMRTA2Q96SC8 542 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 HBQ1P09105 142 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 LSRQ86X29 649 aaPredicted RBP10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 GBF1Q92538 1859 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 EMC4Q5J8M3 183 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 PDPNQ86YL7 162 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 OR2W1Q9Y3N9 320 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 ZNF716A6NP11 495 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 DEFB108AA8MXU0 73 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 HOXD4P09016 255 aaPredicted RBP10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 PNLIPRP2P54317 469 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 MFAP2P55001 183 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 SLC48A1Q6P1K1 146 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 ZDHHC23Q8IYP9 409 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 ABHD14AQ9BUJ0 271 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 SLC6A13Q9NSD5 602 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 MTCH2Q9Y6C9 303 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 PLPPR2Q96GM1 343 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 KIAA1549Q9HCM3 1950 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 RABIFP47224 123 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 OR3A4PP47883 348 aa10.49□□□□□ -0.73
SHROOM3-201ENST00000296043 ZNF79Q15937 498 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms