RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 CXCL1P09341 107 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 PAX1P15863 534 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 PNLIPP16233 465 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 MSR1P21757 451 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 BLVRBP30043 206 aaPredicted RBP9.04□□□□□ -0.96
SKA1-201ENST00000285116 LCN10Q6JVE6 187 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 PRSS58Q8IYP2 241 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 ZNF283Q8N7M2 679 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 M1APQ8TC57 530 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 RAB39BQ96DA2 213 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 WFDC1Q9HC57 220 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 IGF2RP11717 2491 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 MED12Q93074 2177 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 SCGB1D2O95969 90 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 CDAP32320 146 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 PPP1CCP36873 323 aaKnown RBP9.04□□□□□ -0.96
SKA1-201ENST00000285116 ACY1Q03154 408 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 ZNF385CQ66K41 422 aaPredicted RBP9.04□□□□□ -0.96
SKA1-201ENST00000285116 TCEAL6Q6IPX3 200 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 C16orf47Q6ZP98 133 aaPredicted RBP9.04□□□□□ -0.96
SKA1-201ENST00000285116 COMMD2Q86X83 199 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 SULF2Q8IWU5 870 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 RELTQ969Z4 430 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 NABP1Q96AH0 204 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 SPSB1Q96BD6 273 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 NUDT22Q9BRQ3 303 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 MYOTQ9UBF9 498 aa9.04□□□□□ -0.96
SKA1-201ENST00000285116 IGHV3-20A0A0C4DH32 117 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 C2orf72A6NCS6 295 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 ZNF727A8MUV8 499 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 K7N7A8 449 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 SERPINA2P20848 420 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 ANOS1P23352 680 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 UBE2KP61086 200 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 ENDOGQ14249 297 aaKnown RBP9.03□□□□□ -0.96
SKA1-201ENST00000285116 NKAIN1Q4KMZ8 207 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 OR5R1Q8NH85 324 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 FAM213BQ8TBF2 198 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 HPSE2Q8WWQ2 592 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 MRPL24Q96A35 216 aaKnown RBP9.03□□□□□ -0.96
SKA1-201ENST00000285116 BSCL2Q96G97 398 aaPredicted RBP9.03□□□□□ -0.96
SKA1-201ENST00000285116 PGAM5Q96HS1 289 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 TCFL5Q9UL49 500 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 ATXN7L1Q9ULK2 861 aaPredicted RBP9.03□□□□□ -0.96
SKA1-201ENST00000285116 TP53TG5Q9Y2B4 290 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 OTOGLQ3ZCN5 2332 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 SPTA1P02549 2419 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 RBFOX3A6NFN3 312 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 ZNF814B7Z6K7 855 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 MKRN2OSH3BPM6 223 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 UCP3P55916 312 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 PLXDC2Q6UX71 529 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 UNQ6494/PRO21346Q6UXR6 183 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 GALNTL5Q7Z4T8 443 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 C1QL2Q7Z5L3 287 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 CPEB2Q7Z5Q1 589 aaKnown RBP9.03□□□□□ -0.96
SKA1-201ENST00000285116 SEMA6DQ8NFY4 1073 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 OR8G5Q8NG78 346 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 RARRES2Q99969 163 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 SUCNR1Q9BXA5 334 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 ANGPTL4Q9BY76 406 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 SH3BGRL3Q9H299 93 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 PRO1933Q9H354 126 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 ANXA10Q9UJ72 324 aa9.03□□□□□ -0.96
SKA1-201ENST00000285116 RALGAPA1Q6GYQ0 2036 aa9.02□□□□□ -0.96
SKA1-201ENST00000285116 E9PLN8 166 aa9.02□□□□□ -0.96
SKA1-201ENST00000285116 VAMP5O95183 116 aa9.02□□□□□ -0.96
SKA1-201ENST00000285116 MBPP02686 304 aaPredicted RBP9.02□□□□□ -0.96
SKA1-201ENST00000285116 SRFP11831 508 aa9.02□□□□□ -0.96
SKA1-201ENST00000285116 CEACAM6P40199 344 aa9.02□□□□□ -0.96
SKA1-201ENST00000285116 FOXO1Q12778 655 aa9.02□□□□□ -0.96
SKA1-201ENST00000285116 CHAF1BQ13112 559 aa9.02□□□□□ -0.96
SKA1-201ENST00000285116 KRTAP27-1Q3LI81 207 aa9.02□□□□□ -0.96
SKA1-201ENST00000285116 GFI1BQ5VTD9 330 aa9.02□□□□□ -0.96
SKA1-201ENST00000285116 OR2T2Q6IF00 324 aa9.02□□□□□ -0.96
SKA1-201ENST00000285116 ZNF343Q6P1L6 599 aa9.02□□□□□ -0.96
SKA1-201ENST00000285116 SLC22A25Q6T423 547 aa9.02□□□□□ -0.96
SKA1-201ENST00000285116 SLC38A9Q8NBW4 561 aa9.02□□□□□ -0.96
SKA1-201ENST00000285116 SPACA9Q96E40 222 aaPredicted RBP9.02□□□□□ -0.96
SKA1-201ENST00000285116 METTL7AQ9H8H3 244 aa9.02□□□□□ -0.96
SKA1-201ENST00000285116 IL36GQ9NZH8 169 aa9.02□□□□□ -0.96
SKA1-201ENST00000285116 SHISA8B8ZZ34 492 aa9.02□□□□□ -0.97
SKA1-201ENST00000285116 HSD17B6O14756 317 aa9.02□□□□□ -0.97
SKA1-201ENST00000285116 TGOLN2O43493 480 aa9.02□□□□□ -0.97
SKA1-201ENST00000285116 TRGC2P03986 189 aa9.02□□□□□ -0.97
SKA1-201ENST00000285116 FABP4P15090 132 aa9.02□□□□□ -0.97
SKA1-201ENST00000285116 RSPO1Q2MKA7 263 aaPredicted RBP9.02□□□□□ -0.97
SKA1-201ENST00000285116 PDZD11Q5EBL8 140 aa9.02□□□□□ -0.97
SKA1-201ENST00000285116 TMEM182Q6ZP80 229 aaPredicted RBP9.02□□□□□ -0.97
SKA1-201ENST00000285116 TMEM123Q8N131 208 aa9.02□□□□□ -0.97
SKA1-201ENST00000285116 HSD17B11Q8NBQ5 300 aa9.02□□□□□ -0.97
SKA1-201ENST00000285116 OR10G3Q8NGC4 313 aa9.02□□□□□ -0.97
SKA1-201ENST00000285116 OR10AD1Q8NGE0 317 aa9.02□□□□□ -0.97
SKA1-201ENST00000285116 DNASE2BQ8WZ79 361 aa9.02□□□□□ -0.97
SKA1-201ENST00000285116 C18orf12Q96KH6 178 aa9.02□□□□□ -0.97
SKA1-201ENST00000285116 NEU1Q99519 415 aa9.02□□□□□ -0.97
SKA1-201ENST00000285116 ZNF160Q9HCG1 818 aa9.02□□□□□ -0.97
SKA1-201ENST00000285116 MCTS1Q9ULC4 181 aaKnown RBP9.02□□□□□ -0.97
SKA1-201ENST00000285116 KCNIP3Q9Y2W7 256 aa9.02□□□□□ -0.97
SKA1-201ENST00000285116 TGIF2-C20orf24A0A0A6YYL0 155 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms