RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 PAX8Q06710 450 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 P2RY14Q15391 338 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 CD276Q5ZPR3 534 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 OR10K2Q6IF99 312 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 NR2C2APQ86WQ0 139 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 OSR2Q8N2R0 312 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 TMEM104Q8NE00 496 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 OR4S1Q8NGB4 309 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 OR4M1Q8NGD0 313 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 OR51T1Q8NGJ9 327 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 SLC25A28Q96A46 364 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 DCTN5Q9BTE1 182 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 CENPOQ9BU64 300 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 BANF2Q9H503 90 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 C7orf69Q9H7B7 122 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 GLS2Q9UI32 602 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 ANK3Q12955 4377 aaKnown RBP10.54□□□□□ -0.72
SS18-202ENST00000269138 A0A0G2JK05 382 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 DEGS1O15121 323 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 SLC22A1O15245 554 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 ENSAO43768 121 aaKnown RBP10.53□□□□□ -0.72
SS18-202ENST00000269138 ECDO95905 644 aaPredicted RBP10.53□□□□□ -0.72
SS18-202ENST00000269138 ZNF44P15621 663 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 GABRR1P24046 479 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 MYL9P24844 172 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 HTR2CP28335 458 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 OR3A1P47881 315 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 RBM11P57052 281 aaKnown RBP10.53□□□□□ -0.72
SS18-202ENST00000269138 LY6G5BQ8NDX9 201 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 FAM46BQ96A09 425 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 SNX22Q96L94 193 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 MRPS26Q9BYN8 205 aaKnown RBP10.53□□□□□ -0.72
SS18-202ENST00000269138 PLGRKTQ9HBL7 147 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 C19orf12Q9NSK7 152 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 TMEM160Q9NX00 188 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 ST3GAL6Q9Y274 331 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 V9GY05 133 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 WNK2Q9Y3S1 2297 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 NSD1Q96L73 2696 aaPredicted RBP10.53□□□□□ -0.72
SS18-202ENST00000269138 DOCK11Q5JSL3 2073 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 TRAV24A0A0B4J272 114 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 MEX3AA1L020 520 aaKnown RBP10.53□□□□□ -0.72
SS18-202ENST00000269138 J3QLI3 93 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 SLC33A1O00400 549 aaPredicted RBP10.53□□□□□ -0.72
SS18-202ENST00000269138 SLC17A2O00624 439 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 GEMIN2O14893 280 aaKnown RBP10.53□□□□□ -0.72
SS18-202ENST00000269138 GPR37O15354 613 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 ZNF780AO75290 641 aaPredicted RBP10.53□□□□□ -0.72
SS18-202ENST00000269138 CRTAPO75718 401 aaPredicted RBP10.53□□□□□ -0.72
SS18-202ENST00000269138 TFAP2AP05549 437 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 CLEC2LP0C7M8 214 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 PPIAL4GP0DN37 164 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 VSIG8P0DPA2 414 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 GTF2F2P13984 249 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 GATA3P23771 443 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 LMO1P25800 156 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 TGFBR1P36897 503 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 CLDN12P56749 244 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 GPR176Q14439 515 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 IL13RA2Q14627 380 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 RAB11BQ15907 218 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 HES5Q5TA89 166 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 BTNL3Q6UXE8 466 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 OR8H2Q8N162 312 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 OR6M1Q8NGM8 313 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 OR13F1Q8NGS4 319 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 CYYR1Q96J86 154 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 FAM234AQ9H0X4 552 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 PPA2Q9H2U2 334 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 AUP1Q9Y679 476 aa10.53□□□□□ -0.72
SS18-202ENST00000269138 HSPB6O14558 160 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 PDCD5O14737 125 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 AIREO43918 545 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 MGMTP16455 207 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 RAB3BP20337 219 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 SDC2P34741 201 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 ALDH3B2P48448 385 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 LSM3P62310 102 aaKnown RBP10.52□□□□□ -0.73
SS18-202ENST00000269138 ARF6P62330 175 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 QRFPP83859 136 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 EDDM3AQ14507 147 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 GRK1Q15835 563 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 TAF9Q16594 264 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 C11orf91Q3C1V1 193 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 NHLRC3Q5JS37 347 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 TMEM200BQ69YZ2 307 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 BRICD5Q6PL45 260 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 FAM185AQ8N0U4 392 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 TPRX1Q8N7U7 411 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 C8orf46Q8TAG6 207 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 KCTD7Q96MP8 289 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 FUNDC2Q9BWH2 189 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 BEX2Q9BXY8 128 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 SELENOIQ9C0D9 397 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 PCDHB16Q9NRJ7 776 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 GHRLQ9UBU3 117 aa10.52□□□□□ -0.73
SS18-202ENST00000269138 A0A0B4J203 849 aa10.51□□□□□ -0.73
SS18-202ENST00000269138 A0A1W2PQ09 198 aa10.51□□□□□ -0.73
SS18-202ENST00000269138 CRLF1O75462 422 aa10.51□□□□□ -0.73
SS18-202ENST00000269138 OR7C1O76099 320 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms