RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 COL12A1Q99715 3063 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 RPS10P46783 165 aaKnown RBP10.98□□□□□ -0.65
PRPF6-201ENST00000266079 BIDP55957 195 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 NDUFA6P56556 154 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 ROM1Q03395 351 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 OR2A2Q6IF42 318 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 IGFL3Q6UXB1 125 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 BEND4Q6ZU67 534 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 OR13C3Q8NGS6 347 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 OR2V1Q8NHB1 315 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 EIF5A2Q9GZV4 153 aaKnown RBP10.98□□□□□ -0.65
PRPF6-201ENST00000266079 PARP12Q9H0J9 701 aaKnown RBP10.98□□□□□ -0.65
PRPF6-201ENST00000266079 DOK5Q9P104 306 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 B3GAT1Q9P2W7 334 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 HHLA2Q9UM44 414 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 CEACAM18A8MTB9 384 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 GNB3P16520 340 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 ZNF43P17038 809 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 NPY4RP50391 375 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 CLDN18P56856 261 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 SUPT4H1P63272 117 aaKnown RBP10.98□□□□□ -0.65
PRPF6-201ENST00000266079 SLC35A1P78382 337 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 FMODQ06828 376 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 UNC119Q13432 240 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 ACTBL2Q562R1 376 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 NKAIN3Q8N8D7 197 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 S100PBPQ96BU1 408 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 ZNF385AQ96PM9 386 aaKnown RBP10.98□□□□□ -0.65
PRPF6-201ENST00000266079 PRRG4Q9BZD6 226 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 DCAF16Q9NXF7 216 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 GSKIPQ9P0R6 139 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 FBXL17Q9UF56 701 aa10.98□□□□□ -0.65
PRPF6-201ENST00000266079 XKRYO14609 159 aa10.97□□□□□ -0.65
PRPF6-201ENST00000266079 OR2C1O95371 312 aa10.97□□□□□ -0.65
PRPF6-201ENST00000266079 IGHV3-9P01782 118 aa10.97□□□□□ -0.65
PRPF6-201ENST00000266079 SPARCP09486 303 aa10.97□□□□□ -0.65
PRPF6-201ENST00000266079 NDUFB7P17568 137 aa10.97□□□□□ -0.65
PRPF6-201ENST00000266079 RPL12P30050 165 aaKnown RBP10.97□□□□□ -0.65
PRPF6-201ENST00000266079 THBS4P35443 961 aa10.97□□□□□ -0.65
PRPF6-201ENST00000266079 RPS23P62266 143 aaKnown RBP10.97□□□□□ -0.65
PRPF6-201ENST00000266079 KCTD18Q6PI47 426 aaPredicted RBP10.97□□□□□ -0.65
PRPF6-201ENST00000266079 CD300LFQ8TDQ1 290 aa10.97□□□□□ -0.65
PRPF6-201ENST00000266079 ZDHHC11Q9H8X9 412 aa10.97□□□□□ -0.65
PRPF6-201ENST00000266079 FAM212BQ9NTI7 297 aaPredicted RBP10.97□□□□□ -0.65
PRPF6-201ENST00000266079 H7C1Q1 480 aa10.97□□□□□ -0.65
PRPF6-201ENST00000266079 SLC2A1P11166 492 aa10.97□□□□□ -0.65
PRPF6-201ENST00000266079 RAP1AP62834 184 aa10.97□□□□□ -0.65
PRPF6-201ENST00000266079 CSNK2A1P68400 391 aaPredicted RBP10.97□□□□□ -0.65
PRPF6-201ENST00000266079 UEVLDQ8IX04 471 aa10.97□□□□□ -0.65
PRPF6-201ENST00000266079 OR10D4PQ8NGN7 298 aa10.97□□□□□ -0.65
PRPF6-201ENST00000266079 CNTD2Q9H8S5 307 aa10.97□□□□□ -0.65
PRPF6-201ENST00000266079 B3GALT5Q9Y2C3 310 aa10.97□□□□□ -0.65
PRPF6-201ENST00000266079 MEMO1Q9Y316 297 aa10.97□□□□□ -0.65
PRPF6-201ENST00000266079 GJE1A6NN92 205 aa10.96□□□□□ -0.65
PRPF6-201ENST00000266079 ZNF708P17019 499 aa10.96□□□□□ -0.65
PRPF6-201ENST00000266079 FCGR2CP31995 323 aa10.96□□□□□ -0.65
PRPF6-201ENST00000266079 CLDN17P56750 224 aa10.96□□□□□ -0.65
PRPF6-201ENST00000266079 DNLZQ5SXM8 178 aa10.96□□□□□ -0.65
PRPF6-201ENST00000266079 FOXRED2Q8IWF2 684 aa10.96□□□□□ -0.65
PRPF6-201ENST00000266079 RNASE11Q8TAA1 199 aaKnown RBP10.96□□□□□ -0.65
PRPF6-201ENST00000266079 KCNJ16Q9NPI9 418 aa10.96□□□□□ -0.65
PRPF6-201ENST00000266079 SH3BGRL2Q9UJC5 107 aa10.96□□□□□ -0.65
PRPF6-201ENST00000266079 LRP12Q9Y561 859 aa10.96□□□□□ -0.65
PRPF6-201ENST00000266079 CXorf65A6NEN9 183 aa10.96□□□□□ -0.66
PRPF6-201ENST00000266079 SEC14L6B5MCN3 397 aa10.96□□□□□ -0.66
PRPF6-201ENST00000266079 K7EPK0 472 aa10.96□□□□□ -0.66
PRPF6-201ENST00000266079 IFNA10P01566 189 aa10.96□□□□□ -0.66
PRPF6-201ENST00000266079 PI3P19957 117 aa10.96□□□□□ -0.66
PRPF6-201ENST00000266079 RAC3P60763 192 aa10.96□□□□□ -0.66
PRPF6-201ENST00000266079 RPL27P61353 136 aaKnown RBP10.96□□□□□ -0.66
PRPF6-201ENST00000266079 VAX1Q5SQQ9 334 aa10.96□□□□□ -0.66
PRPF6-201ENST00000266079 FAM71E2Q8N5Q1 922 aa10.96□□□□□ -0.66
PRPF6-201ENST00000266079 MAFIPQ8WZ33 124 aa10.96□□□□□ -0.66
PRPF6-201ENST00000266079 ADGRG7Q96K78 797 aa10.96□□□□□ -0.66
PRPF6-201ENST00000266079 CNTNAP3Q9BZ76 1288 aa10.96□□□□□ -0.66
PRPF6-201ENST00000266079 SLC35B3Q9H1N7 401 aa10.96□□□□□ -0.66
PRPF6-201ENST00000266079 LOC107986453A0A1B0GWG9 222 aa10.95□□□□□ -0.66
PRPF6-201ENST00000266079 AQP7P3A6NL99 342 aa10.95□□□□□ -0.66
PRPF6-201ENST00000266079 LMX1BO60663 402 aa10.95□□□□□ -0.66
PRPF6-201ENST00000266079 SCGNO76038 276 aa10.95□□□□□ -0.66
PRPF6-201ENST00000266079 FPR2P25090 351 aa10.95□□□□□ -0.66
PRPF6-201ENST00000266079 DDTP30046 118 aa10.95□□□□□ -0.66
PRPF6-201ENST00000266079 QRFPP83859 136 aa10.95□□□□□ -0.66
PRPF6-201ENST00000266079 ZNF616Q08AN1 781 aa10.95□□□□□ -0.66
PRPF6-201ENST00000266079 CLINT1Q14677 625 aa10.95□□□□□ -0.66
PRPF6-201ENST00000266079 SSX2Q16385 188 aa10.95□□□□□ -0.66
PRPF6-201ENST00000266079 SCGB3A2Q96PL1 93 aa10.95□□□□□ -0.66
PRPF6-201ENST00000266079 RTBDNQ9BSG5 229 aaPredicted RBP10.95□□□□□ -0.66
PRPF6-201ENST00000266079 ABHD6Q9BV23 337 aa10.95□□□□□ -0.66
PRPF6-201ENST00000266079 MRPL22Q9NWU5 206 aaKnown RBP10.95□□□□□ -0.66
PRPF6-201ENST00000266079 DIDO1Q9BTC0 2240 aaKnown RBP10.95□□□□□ -0.66
PRPF6-201ENST00000266079 SPTAN1Q13813 2472 aaKnown RBP10.95□□□□□ -0.66
PRPF6-201ENST00000266079 SFTPBP07988 381 aa10.95□□□□□ -0.66
PRPF6-201ENST00000266079 TMEM33P57088 247 aa10.95□□□□□ -0.66
PRPF6-201ENST00000266079 PKIAP61925 76 aa10.95□□□□□ -0.66
PRPF6-201ENST00000266079 PEG10Q86TG7 708 aaKnown RBP10.95□□□□□ -0.66
PRPF6-201ENST00000266079 RTN4RL2Q86UN3 420 aa10.95□□□□□ -0.66
PRPF6-201ENST00000266079 GCNT2Q8N0V5 402 aa10.95□□□□□ -0.66
PRPF6-201ENST00000266079 Q8NA96 180 aa10.95□□□□□ -0.66
PRPF6-201ENST00000266079 UBAC2Q8NBM4 344 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms