RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 CARHSP1Q9Y2V2 147 aaKnown RBP9.56□□□□□ -0.88
MSH3-201ENST00000265081 FAM166BA8MTA8 275 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 LGALS8O00214 317 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 TNFSF15O95150 251 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 ITGA3P26006 1051 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 HERPUD1Q15011 391 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 MARC2Q969Z3 335 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 MRPL24Q96A35 216 aaKnown RBP9.55□□□□□ -0.88
MSH3-201ENST00000265081 ABHD14BQ96IU4 210 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 MMP26Q9NRE1 261 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 PCDHB10Q9UN67 800 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 DUXBA0A1W2PPF3 345 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 TEX46H3BTG2 121 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 RBMXP38159 391 aaKnown RBP9.55□□□□□ -0.88
MSH3-201ENST00000265081 SHEQ5VZ18 495 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 HS3ST6Q96QI5 342 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 PLEKHA2Q9HB19 425 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 LPAR3Q9UBY5 353 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 C5orf49A4QMS7 147 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 OR5B21A6NL26 309 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 FAM157AC9JC47 383 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 TRIM77I1YAP6 450 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 HLA-HP01893 362 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 PRSS12P56730 875 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 ERVK11-1P61568 191 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 ZNF273Q14593 569 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 FBXW9Q5XUX1 488 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 MKXQ8IYA7 352 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 UBAC2Q8NBM4 344 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 BPIFCQ8NFQ6 507 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 OR1S2Q8NGQ3 325 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 OR51I2Q9H344 312 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 CALHM2Q9HA72 323 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 ELL3Q9HB65 397 aaPredicted RBP9.55□□□□□ -0.88
MSH3-201ENST00000265081 GLRX2Q9NS18 164 aa9.55□□□□□ -0.88
MSH3-201ENST00000265081 DIRAS3O95661 229 aa9.54□□□□□ -0.88
MSH3-201ENST00000265081 RFC3P40938 356 aa9.54□□□□□ -0.88
MSH3-201ENST00000265081 UNQ6126/PRO20091Q6UXV3 157 aa9.54□□□□□ -0.88
MSH3-201ENST00000265081 SLC25A26Q70HW3 274 aa9.54□□□□□ -0.88
MSH3-201ENST00000265081 OR4A4PQ8NGN8 299 aa9.54□□□□□ -0.88
MSH3-201ENST00000265081 ZNF552Q9H707 407 aaPredicted RBP9.54□□□□□ -0.88
MSH3-201ENST00000265081 K7EPK0 472 aa9.54□□□□□ -0.88
MSH3-201ENST00000265081 CNOT4O95628 575 aaKnown RBP9.54□□□□□ -0.88
MSH3-201ENST00000265081 OR5AC1P0C628 307 aa9.54□□□□□ -0.88
MSH3-201ENST00000265081 ADCYAP1P18509 176 aa9.54□□□□□ -0.88
MSH3-201ENST00000265081 SULT1A2P50226 295 aa9.54□□□□□ -0.88
MSH3-201ENST00000265081 RAB1AP62820 205 aa9.54□□□□□ -0.88
MSH3-201ENST00000265081 SLC10A1Q14973 349 aa9.54□□□□□ -0.88
MSH3-201ENST00000265081 ATXN7L3Q14CW9 347 aaPredicted RBP9.54□□□□□ -0.88
MSH3-201ENST00000265081 FAM71E2Q8N5Q1 922 aa9.54□□□□□ -0.88
MSH3-201ENST00000265081 RTN4IP1Q8WWV3 396 aaPredicted RBP9.54□□□□□ -0.88
MSH3-201ENST00000265081 USB1Q9BQ65 265 aaKnown RBP9.54□□□□□ -0.88
MSH3-201ENST00000265081 METTL8Q9H825 291 aaKnown RBP9.54□□□□□ -0.88
MSH3-201ENST00000265081 PPYP01298 95 aa9.54□□□□□ -0.88
MSH3-201ENST00000265081 MBPP02686 304 aaPredicted RBP9.54□□□□□ -0.88
MSH3-201ENST00000265081 AADACP22760 399 aa9.54□□□□□ -0.88
MSH3-201ENST00000265081 GNRHRP30968 328 aa9.54□□□□□ -0.88
MSH3-201ENST00000265081 FCGR2CP31995 323 aa9.54□□□□□ -0.88
MSH3-201ENST00000265081 OPRM1P35372 400 aa9.54□□□□□ -0.88
MSH3-201ENST00000265081 SP5Q6BEB4 398 aaPredicted RBP9.54□□□□□ -0.88
MSH3-201ENST00000265081 BTNL8Q6UX41 500 aa9.54□□□□□ -0.88
MSH3-201ENST00000265081 MRPL30Q8TCC3 161 aaKnown RBP9.54□□□□□ -0.88
MSH3-201ENST00000265081 GMPPAQ96IJ6 420 aaPredicted RBP9.54□□□□□ -0.88
MSH3-201ENST00000265081 PRRX2Q99811 253 aa9.54□□□□□ -0.88
MSH3-201ENST00000265081 RIMS4Q9H426 269 aaPredicted RBP9.54□□□□□ -0.88
MSH3-201ENST00000265081 PRSS50Q9UI38 385 aa9.54□□□□□ -0.88
MSH3-201ENST00000265081 IGKV1-6A0A0C4DH72 117 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 DNASE2O00115 360 aaPredicted RBP9.53□□□□□ -0.88
MSH3-201ENST00000265081 IGHV3-9P01782 118 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 IAH1Q2TAA2 248 aaPredicted RBP9.53□□□□□ -0.88
MSH3-201ENST00000265081 PCSK4Q6UW60 755 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 DHRS13Q6UX07 377 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 CCDC36Q8IYA8 594 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 EXTL1Q92935 676 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 IL22RA2Q969J5 263 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 TMEM222Q9H0R3 208 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 ZFP57Q9NU63 452 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 TMED3Q9Y3Q3 217 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 ATP23Q9Y6H3 246 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 CD300LBA8K4G0 201 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 KNG1P01042 644 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 NGFP01138 241 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 CD46P15529 392 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 P2RY1P47900 373 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 TNFSF10P50591 281 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 SRYQ05066 204 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 TGIF1Q15583 401 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 Q6P435 159 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 DMBX1Q8NFW5 382 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 SLAMF9Q96A28 289 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 ZFHX4Q86UP3 3567 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 A0A096LPE4 126 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 A0A1W2PPZ6 126 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 SRPXP78539 464 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 GPR157Q5UAW9 335 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 LINC00696Q6ZRV3 163 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 GINS3Q9BRX5 216 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 HIPK2Q9H2X6 1198 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 ASCL3Q9NQ33 180 aa9.53□□□□□ -0.88
MSH3-201ENST00000265081 PARP11Q9NR21 331 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms