RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 SULT1B1O43704 296 aa13.03□□□□□ -0.32
USE1-201ENST00000263897 ERP29P30040 261 aaKnown RBP13.03□□□□□ -0.32
USE1-201ENST00000263897 OR3A1P47881 315 aa13.03□□□□□ -0.32
USE1-201ENST00000263897 ETV1P50549 477 aa13.03□□□□□ -0.32
USE1-201ENST00000263897 KISS1Q15726 138 aa13.03□□□□□ -0.32
USE1-201ENST00000263897 LY6EQ16553 131 aa13.03□□□□□ -0.32
USE1-201ENST00000263897 LRRC36Q1X8D7 754 aa13.03□□□□□ -0.32
USE1-201ENST00000263897 CCDC58Q4VC31 144 aa13.03□□□□□ -0.32
USE1-201ENST00000263897 ZNF691Q5VV52 312 aa13.03□□□□□ -0.32
USE1-201ENST00000263897 TTC23Q5W5X9 447 aa13.03□□□□□ -0.32
USE1-201ENST00000263897 MALSU1Q96EH3 234 aa13.03□□□□□ -0.32
USE1-201ENST00000263897 EXOSC4Q9NPD3 245 aaKnown RBP13.03□□□□□ -0.32
USE1-201ENST00000263897 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.03□□□□□ -0.32
USE1-201ENST00000263897 FBLN5Q9UBX5 448 aa13.03□□□□□ -0.32
USE1-201ENST00000263897 TBL2Q9Y4P3 447 aaKnown RBP13.03□□□□□ -0.32
USE1-201ENST00000263897 TRRAPQ9Y4A5 3859 aa13.03□□□□□ -0.32
USE1-201ENST00000263897 VGLL3A8MV65 326 aa13.02□□□□□ -0.33
USE1-201ENST00000263897 ODF3BA8MYP8 253 aa13.02□□□□□ -0.33
USE1-201ENST00000263897 SIRPB1O00241 398 aa13.02□□□□□ -0.33
USE1-201ENST00000263897 CLIC3O95833 236 aa13.02□□□□□ -0.33
USE1-201ENST00000263897 OR2H2O95918 312 aa13.02□□□□□ -0.33
USE1-201ENST00000263897 ARG1P05089 322 aa13.02□□□□□ -0.33
USE1-201ENST00000263897 HCKP08631 526 aa13.02□□□□□ -0.33
USE1-201ENST00000263897 TMEM225BP0DP42 221 aa13.02□□□□□ -0.33
USE1-201ENST00000263897 ZP1P60852 638 aa13.02□□□□□ -0.33
USE1-201ENST00000263897 ZNF626Q68DY1 528 aa13.02□□□□□ -0.33
USE1-201ENST00000263897 RPL22L1Q6P5R6 122 aaKnown RBP13.02□□□□□ -0.33
USE1-201ENST00000263897 TMPRSS11AQ6ZMR5 421 aa13.02□□□□□ -0.33
USE1-201ENST00000263897 DYNAPQ8N1N2 210 aa13.02□□□□□ -0.33
USE1-201ENST00000263897 PACRGLQ8N7B6 248 aa13.02□□□□□ -0.33
USE1-201ENST00000263897 CNIH3Q8TBE1 160 aa13.02□□□□□ -0.33
USE1-201ENST00000263897 TSEN15Q8WW01 171 aaKnown RBP13.02□□□□□ -0.33
USE1-201ENST00000263897 C8orf4Q9NR00 106 aa13.02□□□□□ -0.33
USE1-201ENST00000263897 PCDHGB5Q9Y5G0 923 aa13.02□□□□□ -0.33
USE1-201ENST00000263897 A0A0G2JK05 382 aa13.01□□□□□ -0.33
USE1-201ENST00000263897 IRGMA1A4Y4 181 aa13.01□□□□□ -0.33
USE1-201ENST00000263897 KIR2DS4P43632 304 aa13.01□□□□□ -0.33
USE1-201ENST00000263897 P2RX3P56373 397 aa13.01□□□□□ -0.33
USE1-201ENST00000263897 ADARB1P78563 741 aaKnown RBP13.01□□□□□ -0.33
USE1-201ENST00000263897 SCN1BQ07699 218 aa13.01□□□□□ -0.33
USE1-201ENST00000263897 IL18R1Q13478 541 aa13.01□□□□□ -0.33
USE1-201ENST00000263897 LDLRAD2Q5SZI1 272 aa13.01□□□□□ -0.33
USE1-201ENST00000263897 OR2G6Q5TZ20 316 aa13.01□□□□□ -0.33
USE1-201ENST00000263897 XAF1Q6GPH4 301 aa13.01□□□□□ -0.33
USE1-201ENST00000263897 ASPHD2Q6ICH7 369 aa13.01□□□□□ -0.33
USE1-201ENST00000263897 ZNF529Q6P280 563 aa13.01□□□□□ -0.33
USE1-201ENST00000263897 Q6P435 159 aa13.01□□□□□ -0.33
USE1-201ENST00000263897 DHRSXQ8N5I4 330 aa13.01□□□□□ -0.33
USE1-201ENST00000263897 CYGBQ8WWM9 190 aa13.01□□□□□ -0.33
USE1-201ENST00000263897 RGP1Q92546 391 aaPredicted RBP13.01□□□□□ -0.33
USE1-201ENST00000263897 CORO2AQ92828 525 aa13.01□□□□□ -0.33
USE1-201ENST00000263897 RAB18Q9NP72 206 aa13.01□□□□□ -0.33
USE1-201ENST00000263897 BABAM2Q9NXR7 383 aa13.01□□□□□ -0.33
USE1-201ENST00000263897 UBE2J1Q9Y385 318 aaPredicted RBP13.01□□□□□ -0.33
USE1-201ENST00000263897 SESN1Q9Y6P5 492 aa13.01□□□□□ -0.33
USE1-201ENST00000263897 FUOMA2VDF0 154 aa13□□□□□ -0.33
USE1-201ENST00000263897 TIMM23O14925 209 aa13□□□□□ -0.33
USE1-201ENST00000263897 DEGS1O15121 323 aa13□□□□□ -0.33
USE1-201ENST00000263897 OGG1O15527 345 aa13□□□□□ -0.33
USE1-201ENST00000263897 ZNF44P15621 663 aa13□□□□□ -0.33
USE1-201ENST00000263897 RAB3AP20336 220 aa13□□□□□ -0.33
USE1-201ENST00000263897 GABRA5P31644 462 aa13□□□□□ -0.33
USE1-201ENST00000263897 SOX2P48431 317 aa13□□□□□ -0.33
USE1-201ENST00000263897 RAB13P51153 203 aa13□□□□□ -0.33
USE1-201ENST00000263897 AESQ08117 197 aa13□□□□□ -0.33
USE1-201ENST00000263897 DYNC1I2Q13409 638 aaKnown RBP13□□□□□ -0.33
USE1-201ENST00000263897 CDK5R1Q15078 307 aa13□□□□□ -0.33
USE1-201ENST00000263897 SSX2Q16385 188 aa13□□□□□ -0.33
USE1-201ENST00000263897 CHST4Q8NCG5 386 aa13□□□□□ -0.33
USE1-201ENST00000263897 SETD9Q8NE22 299 aa13□□□□□ -0.33
USE1-201ENST00000263897 PXT1Q8NFP0 134 aa13□□□□□ -0.33
USE1-201ENST00000263897 RPS4Y2Q8TD47 263 aa13□□□□□ -0.33
USE1-201ENST00000263897 GPR148Q8TDV2 347 aa13□□□□□ -0.33
USE1-201ENST00000263897 FOXRED1Q96CU9 486 aaPredicted RBP13□□□□□ -0.33
USE1-201ENST00000263897 TMEM133Q9H2Q1 129 aa13□□□□□ -0.33
USE1-201ENST00000263897 TCF7L1Q9HCS4 588 aa13□□□□□ -0.33
USE1-201ENST00000263897 DIMT1Q9UNQ2 313 aaKnown RBP13□□□□□ -0.33
USE1-201ENST00000263897 SIRT4Q9Y6E7 314 aaPredicted RBP13□□□□□ -0.33
USE1-201ENST00000263897 VWFP04275 2813 aa12.99□□□□□ -0.33
USE1-201ENST00000263897 MEGF11A6BM72 1044 aa12.99□□□□□ -0.33
USE1-201ENST00000263897 M0QZ24 198 aa12.99□□□□□ -0.33
USE1-201ENST00000263897 MAGEB3O15480 346 aa12.99□□□□□ -0.33
USE1-201ENST00000263897 MMP23AO75900 390 aa12.99□□□□□ -0.33
USE1-201ENST00000263897 CD2P06729 351 aa12.99□□□□□ -0.33
USE1-201ENST00000263897 GLIPR1P48060 266 aa12.99□□□□□ -0.33
USE1-201ENST00000263897 MTNR1BP49286 362 aa12.99□□□□□ -0.33
USE1-201ENST00000263897 RCN1Q15293 331 aa12.99□□□□□ -0.33
USE1-201ENST00000263897 FAM189A2Q15884 450 aa12.99□□□□□ -0.33
USE1-201ENST00000263897 ELP2Q6IA86 826 aa12.99□□□□□ -0.33
USE1-201ENST00000263897 LIAT1Q6ZQX7 453 aa12.99□□□□□ -0.33
USE1-201ENST00000263897 TRAPPC6BQ86SZ2 158 aa12.99□□□□□ -0.33
USE1-201ENST00000263897 OR51A2Q8NGJ7 313 aa12.99□□□□□ -0.33
USE1-201ENST00000263897 TMEM80Q96HE8 168 aa12.99□□□□□ -0.33
USE1-201ENST00000263897 CDCA4Q9BXL8 241 aa12.99□□□□□ -0.33
USE1-201ENST00000263897 CLEC7AQ9BXN2 247 aa12.99□□□□□ -0.33
USE1-201ENST00000263897 TAS2R3Q9NYW6 316 aa12.99□□□□□ -0.33
USE1-201ENST00000263897 CLEC2DQ9UHP7 191 aa12.99□□□□□ -0.33
USE1-201ENST00000263897 EXOSC1Q9Y3B2 195 aaKnown RBP12.99□□□□□ -0.33
USE1-201ENST00000263897 MEGF8Q7Z7M0 2845 aa12.99□□□□□ -0.33
USE1-201ENST00000263897 TRGV10A0A0A0MS01 117 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms