RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 CD200P41217 278 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 RPS23P62266 143 aaKnown RBP16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 GUCA2AQ02747 115 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 JOSD1Q15040 202 aaPredicted RBP16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 ZNF674Q2M3X9 581 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 AARDQ4LEZ3 155 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 TPRP12270 2363 aaKnown RBP16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 CACNA1CQ13936 2221 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 IGKV3D-15A0A087WSY6 115 aa16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 M0R143 59 aa16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 SYT7O43581 403 aa16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 RPP30P78346 268 aaKnown RBP16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 IL13RA1P78552 427 aa16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 MEF2DQ14814 521 aa16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 ZSCAN4Q8NAM6 433 aaPredicted RBP16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 RGP1Q92546 391 aaPredicted RBP16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 AQP10Q96PS8 301 aa16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 CNN2Q99439 309 aaKnown RBP16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 RNF126Q9BV68 326 aa16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 RIMS4Q9H426 269 aaPredicted RBP16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 TAF9BQ9HBM6 251 aa16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 IGKV1D-43A0A0B4J1Z2 117 aa16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 C5orf51A6NDU8 294 aa16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 EREGO14944 169 aa16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 TSPAN15O95858 294 aa16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 NAA10P41227 235 aaPredicted RBP16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 HIST3H3Q16695 136 aa16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 MOGAT2Q3SYC2 334 aa16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 ZNF324BQ6AW86 544 aaPredicted RBP16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 DNM1P34Q6PK57 102 aa16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 SLC22A25Q6T423 547 aa16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 TMEM123Q8N131 208 aa16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 RPS4Y2Q8TD47 263 aa16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 OR2S2Q9NQN1 319 aa16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 NCOA6Q14686 2063 aaPredicted RBP16.44■□□□□ 0.22
COL4A3BP-201ENST00000261415 KCNAB3O43448 404 aa16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 GPANK1O95872 356 aa16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 NTF4P34130 210 aa16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 BIVMQ86UB2 503 aa16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 FOXN4Q96NZ1 517 aa16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 SLC17A5Q9NRA2 495 aa16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 SLC22A20A6NK97 555 aa16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 OR8U9P0C7N5 309 aa16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 LYL1P12980 280 aa16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 SNCAP37840 140 aa16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 RNPS1Q15287 305 aaKnown RBP16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 GUK1Q16774 197 aa16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 Q6ZRG5 221 aa16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 ADGRE4PQ86SQ3 457 aa16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 ZNF664Q8N3J9 261 aa16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 CISD2Q8N5K1 135 aaKnown RBP16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 OR8U1Q8NH10 309 aa16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 MUCL1Q96DR8 90 aa16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 RRNAD1Q96FB5 475 aaKnown RBP16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 TMEM208Q9BTX3 173 aa16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 CRLF2Q9HC73 371 aa16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 KCNJ16Q9NPI9 418 aa16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 COA3Q9Y2R0 106 aaPredicted RBP16.43■□□□□ 0.22
COL4A3BP-201ENST00000261415 MEIS3P1A6NDR6 274 aa16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 CSNK1A1P48729 337 aa16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 GLO1Q04760 184 aa16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 KRTCAP3Q53RY4 240 aa16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 GGNBP1Q5YKI7 109 aa16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 ZDHHC22Q8N966 263 aa16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 RNASEH2CQ8TDP1 164 aaKnown RBP16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 MCHR2Q969V1 340 aa16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 PRRT1Q99946 306 aa16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 ACTR3CQ9C0K3 210 aaPredicted RBP16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 DNAJB11Q9UBS4 358 aa16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 TMEM269A0A1B0GVZ9 245 aa16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 UCP2P55851 309 aa16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 PPP1R1AQ13522 171 aa16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 Q499Y3 187 aa16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 PRSS54Q6PEW0 395 aa16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 AAED1Q7RTV5 226 aa16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 TMEM54Q969K7 222 aa16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 TMEM45BQ96B21 275 aa16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 TTTY10Q9BZA0 68 aa16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 CLCF1Q9UBD9 225 aa16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 OR14J1Q9UGF5 321 aa16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 FOXD3Q9UJU5 478 aaPredicted RBP16.42■□□□□ 0.22
COL4A3BP-201ENST00000261415 ATRXP46100 2492 aa16.41■□□□□ 0.22
COL4A3BP-201ENST00000261415 CYB5AP00167 134 aa16.41■□□□□ 0.22
COL4A3BP-201ENST00000261415 HLA-DQA2P01906 255 aa16.41■□□□□ 0.22
COL4A3BP-201ENST00000261415 QDPRP09417 244 aa16.41■□□□□ 0.22
COL4A3BP-201ENST00000261415 ZNF735P0CB33 412 aa16.41■□□□□ 0.22
COL4A3BP-201ENST00000261415 FCGR2AP12318 317 aa16.41■□□□□ 0.22
COL4A3BP-201ENST00000261415 KIR3DL2P43630 455 aa16.41■□□□□ 0.22
COL4A3BP-201ENST00000261415 PHYHD1Q5SRE7 291 aa16.41■□□□□ 0.22
COL4A3BP-201ENST00000261415 TUSC5Q8IXB3 177 aa16.41■□□□□ 0.22
COL4A3BP-201ENST00000261415 SLC35F2Q8IXU6 374 aa16.41■□□□□ 0.22
COL4A3BP-201ENST00000261415 RFLNBQ8N5W9 214 aa16.41■□□□□ 0.22
COL4A3BP-201ENST00000261415 CD300LFQ8TDQ1 290 aa16.41■□□□□ 0.22
COL4A3BP-201ENST00000261415 HPSE2Q8WWQ2 592 aa16.41■□□□□ 0.22
COL4A3BP-201ENST00000261415 SLC5A7Q9GZV3 580 aa16.41■□□□□ 0.22
COL4A3BP-201ENST00000261415 SLC35B3Q9H1N7 401 aa16.41■□□□□ 0.22
COL4A3BP-201ENST00000261415 NCOR1P1Q9H4R4 102 aa16.41■□□□□ 0.22
COL4A3BP-201ENST00000261415 SLC2A8Q9NY64 477 aa16.41■□□□□ 0.22
COL4A3BP-201ENST00000261415 INTS1Q8N201 2190 aaKnown RBP16.41■□□□□ 0.22
COL4A3BP-201ENST00000261415 LOC100509620A0A075B734 347 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms