RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 HOXA4Q00056 320 aaPredicted RBP7.89□□□□□ -1.15
SYDE2-201ENST00000234668 PJVKQ0ZLH3 352 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 CLINT1Q14677 625 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 SMCO1Q147U7 214 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 DAZAP2Q15038 168 aaPredicted RBP7.89□□□□□ -1.15
SYDE2-201ENST00000234668 CNN3Q15417 329 aaKnown RBP7.89□□□□□ -1.15
SYDE2-201ENST00000234668 FAM189A2Q15884 450 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 ATP1A1-AS1Q5TC04 95 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 CTRB2Q6GPI1 263 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 C6orf15Q6UXA7 325 aaPredicted RBP7.89□□□□□ -1.15
SYDE2-201ENST00000234668 C17orf78Q8N4C9 275 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 CPT1CQ8TCG5 803 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 SPSB1Q96BD6 273 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 AKR1E2Q96JD6 320 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 KCNIP3Q9Y2W7 256 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 A0A1W2PNU3 283 aaPredicted RBP7.89□□□□□ -1.15
SYDE2-201ENST00000234668 MEX3AA1L020 520 aaKnown RBP7.89□□□□□ -1.15
SYDE2-201ENST00000234668 RNASEK-C17orf49H0YIS7 233 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 DEDDO75618 318 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 ITGA3P26006 1051 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 ZNF133P52736 654 aaPredicted RBP7.89□□□□□ -1.15
SYDE2-201ENST00000234668 FOXO1Q12778 655 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 MALLQ13021 153 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 TMEM187Q14656 261 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 IZUMO4Q1ZYL8 232 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 C1orf210Q8IVY1 113 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 SVBPQ8N300 66 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 ADAMTS17Q8TE56 1095 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 ADGRG7Q96K78 797 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 BCO1Q9HAY6 547 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 STARD10Q9Y365 291 aa7.89□□□□□ -1.15
SYDE2-201ENST00000234668 RAB19A4D1S5 217 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 HSD17B6O14756 317 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 DUSP3P51452 185 aaPredicted RBP7.88□□□□□ -1.15
SYDE2-201ENST00000234668 TMEM268Q5VZI3 342 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 PRR18Q8N4B5 295 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 PCSK5Q92824 1860 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 INTS12Q96CB8 462 aaKnown RBP7.88□□□□□ -1.15
SYDE2-201ENST00000234668 GUCD1Q96NT3 240 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 ABHD14AQ9BUJ0 271 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 SF3B5Q9BWJ5 86 aaKnown RBP7.88□□□□□ -1.15
SYDE2-201ENST00000234668 NAA60Q9H7X0 242 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 MMP26Q9NRE1 261 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 ZDHHC8Q9ULC8 765 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 MEMO1Q9Y316 297 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 PCNX2A6NKB5 2137 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 NKX2-6A6NCS4 301 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 FAM24AA6NFZ4 105 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 SYNGR1O43759 233 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 CER1O95813 267 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 SFTA3P0C7M3 94 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 PVALBP20472 110 aaPredicted RBP7.88□□□□□ -1.15
SYDE2-201ENST00000234668 FBXW12Q6X9E4 464 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 WDR5BQ86VZ2 330 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 SLC35G3Q8N808 338 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 RDH5Q92781 318 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 NRIP2Q9BQI9 281 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 MLXQ9UH92 298 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 IL17BQ9UHF5 180 aa7.88□□□□□ -1.15
SYDE2-201ENST00000234668 PURGQ9UJV8 347 aaKnown RBP7.88□□□□□ -1.15
SYDE2-201ENST00000234668 RIF1Q5UIP0 2472 aaKnown RBP7.88□□□□□ -1.15
SYDE2-201ENST00000234668 C9orf172C9J069 976 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 NEURL1O76050 574 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 PRH1P02810 166 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 MMP7P09237 267 aaPredicted RBP7.87□□□□□ -1.15
SYDE2-201ENST00000234668 TDGF1P13385 188 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 SELEP16581 610 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 FUT6P51993 359 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 POLR2GP62487 172 aaKnown RBP eCLIP7.87□□□□□ -1.15
SYDE2-201ENST00000234668 NAAAQ02083 359 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 DHRS11Q6UWP2 260 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 LHFPL2Q6ZUX7 228 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 EXTL1Q92935 676 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 ZNF552Q9H707 407 aaPredicted RBP7.87□□□□□ -1.15
SYDE2-201ENST00000234668 ZNF816-ZNF321PA0A0X1KG74 233 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 ARGFXA6NJG6 315 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 ZNF732B4DXR9 585 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 H7C2Y5 167 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 PDCD6O75340 191 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 PET100P0DJ07 73 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 LYL1P12980 280 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 CAV2P51636 162 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 CEBPGP53567 150 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 GFRA1P56159 465 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 RBM11P57052 281 aaKnown RBP7.87□□□□□ -1.15
SYDE2-201ENST00000234668 HERV-K104P61576 105 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 PRDX4Q13162 271 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 SWI5Q1ZZU3 235 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 MIDNQ504T8 468 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 HIKESHIQ53FT3 197 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 CXorf66Q5JRM2 361 aaPredicted RBP7.87□□□□□ -1.15
SYDE2-201ENST00000234668 TMEM217Q8N7C4 229 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 KCNE4Q8WWG9 221 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 DEFB127Q9H1M4 99 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 ESRP2Q9H6T0 727 aaKnown RBP7.87□□□□□ -1.15
SYDE2-201ENST00000234668 ZNF286AQ9HBT8 521 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 CADP27708 2225 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 ROS1P08922 2347 aa7.87□□□□□ -1.15
SYDE2-201ENST00000234668 IGKV1D-13A0A0B4J2D9 117 aa7.86□□□□□ -1.15
SYDE2-201ENST00000234668 EIF3GO75821 320 aaKnown RBP eCLIP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms