RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 IGHV3-9P01782 118 aa19.16■□□□□ 0.66
CCDC9-201ENST00000221922 EDN3P14138 238 aa19.16■□□□□ 0.66
CCDC9-201ENST00000221922 CHATP28329 748 aa19.16■□□□□ 0.66
CCDC9-201ENST00000221922 ARF1P84077 181 aaKnown RBP19.16■□□□□ 0.66
CCDC9-201ENST00000221922 SAV1Q9H4B6 383 aaPredicted RBP19.16■□□□□ 0.66
CCDC9-201ENST00000221922 POMT1Q9Y6A1 747 aa19.16■□□□□ 0.66
CCDC9-201ENST00000221922 KLRC4-KLRK1H3BQV0 150 aa19.15■□□□□ 0.66
CCDC9-201ENST00000221922 MEOX1P50221 254 aa19.15■□□□□ 0.66
CCDC9-201ENST00000221922 TMEM33P57088 247 aa19.15■□□□□ 0.66
CCDC9-201ENST00000221922 PDZK1IP1Q13113 114 aa19.15■□□□□ 0.66
CCDC9-201ENST00000221922 COLCA1Q6ZS62 124 aa19.15■□□□□ 0.66
CCDC9-201ENST00000221922 LYPD6BQ8NI32 183 aa19.15■□□□□ 0.66
CCDC9-201ENST00000221922 GALNT14Q96FL9 552 aa19.15■□□□□ 0.66
CCDC9-201ENST00000221922 PLEKHA2Q9HB19 425 aa19.15■□□□□ 0.66
CCDC9-201ENST00000221922 ZFP57Q9NU63 452 aa19.15■□□□□ 0.66
CCDC9-201ENST00000221922 ZNF724A8MTY0 619 aa19.15■□□□□ 0.66
CCDC9-201ENST00000221922 RRADP55042 308 aa19.15■□□□□ 0.66
CCDC9-201ENST00000221922 PRSS12P56730 875 aa19.15■□□□□ 0.66
CCDC9-201ENST00000221922 PIGPP57054 158 aa19.15■□□□□ 0.66
CCDC9-201ENST00000221922 CPEB3Q8NE35 698 aaKnown RBP19.15■□□□□ 0.66
CCDC9-201ENST00000221922 PIGCQ92535 297 aa19.15■□□□□ 0.66
CCDC9-201ENST00000221922 POM121Q96HA1 1249 aa19.15■□□□□ 0.66
CCDC9-201ENST00000221922 MED13Q9UHV7 2174 aa19.14■□□□□ 0.66
CCDC9-201ENST00000221922 FREM2Q5SZK8 3169 aa19.14■□□□□ 0.65
CCDC9-201ENST00000221922 FBXO24O75426 580 aa19.14■□□□□ 0.65
CCDC9-201ENST00000221922 COX5BP10606 129 aa19.14■□□□□ 0.65
CCDC9-201ENST00000221922 F2RL1P55085 397 aa19.14■□□□□ 0.65
CCDC9-201ENST00000221922 TUSC5Q8IXB3 177 aa19.14■□□□□ 0.65
CCDC9-201ENST00000221922 UBAC2Q8NBM4 344 aa19.14■□□□□ 0.65
CCDC9-201ENST00000221922 PRRG4Q9BZD6 226 aa19.14■□□□□ 0.65
CCDC9-201ENST00000221922 ARV1Q9H2C2 271 aa19.14■□□□□ 0.65
CCDC9-201ENST00000221922 NAA60Q9H7X0 242 aa19.14■□□□□ 0.65
CCDC9-201ENST00000221922 ZNF581Q9P0T4 197 aa19.14■□□□□ 0.65
CCDC9-201ENST00000221922 KCNIP3Q9Y2W7 256 aa19.14■□□□□ 0.65
CCDC9-201ENST00000221922 SFTA3P0C7M3 94 aa19.13■□□□□ 0.65
CCDC9-201ENST00000221922 ZNF728P0DKX0 622 aa19.13■□□□□ 0.65
CCDC9-201ENST00000221922 TMEM187Q14656 261 aa19.13■□□□□ 0.65
CCDC9-201ENST00000221922 LRTM2Q8N967 370 aa19.13■□□□□ 0.65
CCDC9-201ENST00000221922 ZFP62Q8NB50 900 aaPredicted RBP19.13■□□□□ 0.65
CCDC9-201ENST00000221922 SULT4A1Q9BR01 284 aa19.13■□□□□ 0.65
CCDC9-201ENST00000221922 CALHM2Q9HA72 323 aa19.13■□□□□ 0.65
CCDC9-201ENST00000221922 PARD6AQ9NPB6 346 aa19.13■□□□□ 0.65
CCDC9-201ENST00000221922 IGKV1-12A0A0C4DH73 117 aa19.13■□□□□ 0.65
CCDC9-201ENST00000221922 ZNF850A8MQ14 1090 aa19.13■□□□□ 0.65
CCDC9-201ENST00000221922 FAM157AC9JC47 383 aa19.13■□□□□ 0.65
CCDC9-201ENST00000221922 IGKV1D-12P01611 117 aa19.13■□□□□ 0.65
CCDC9-201ENST00000221922 CD46P15529 392 aa19.13■□□□□ 0.65
CCDC9-201ENST00000221922 SOX8P57073 446 aa19.13■□□□□ 0.65
CCDC9-201ENST00000221922 LSM5Q9Y4Y9 91 aaKnown RBP19.13■□□□□ 0.65
CCDC9-201ENST00000221922 PRKACAP17612 351 aa19.12■□□□□ 0.65
CCDC9-201ENST00000221922 OPRM1P35372 400 aa19.12■□□□□ 0.65
CCDC9-201ENST00000221922 FBXL14Q8N1E6 418 aa19.12■□□□□ 0.65
CCDC9-201ENST00000221922 OR10AD1Q8NGE0 317 aa19.12■□□□□ 0.65
CCDC9-201ENST00000221922 E5RGE8 158 aa19.12■□□□□ 0.65
CCDC9-201ENST00000221922 GEMIN2O14893 280 aaKnown RBP19.12■□□□□ 0.65
CCDC9-201ENST00000221922 MBPP02686 304 aaPredicted RBP19.12■□□□□ 0.65
CCDC9-201ENST00000221922 HOXA1P49639 335 aaPredicted RBP19.12■□□□□ 0.65
CCDC9-201ENST00000221922 NUBP1P53384 320 aa19.12■□□□□ 0.65
CCDC9-201ENST00000221922 DVL1P1P54792 670 aaPredicted RBP19.12■□□□□ 0.65
CCDC9-201ENST00000221922 RNPS1Q15287 305 aaKnown RBP19.12■□□□□ 0.65
CCDC9-201ENST00000221922 ATP1A1-AS1Q5TC04 95 aa19.12■□□□□ 0.65
CCDC9-201ENST00000221922 ST3GAL6Q9Y274 331 aa19.12■□□□□ 0.65
CCDC9-201ENST00000221922 NSG2Q9Y328 171 aa19.12■□□□□ 0.65
CCDC9-201ENST00000221922 FREM1Q5H8C1 2179 aa19.11■□□□□ 0.65
CCDC9-201ENST00000221922 CDRT15L2A8MXV6 281 aa19.11■□□□□ 0.65
CCDC9-201ENST00000221922 H7C1Q1 480 aa19.11■□□□□ 0.65
CCDC9-201ENST00000221922 PMELP40967 661 aa19.11■□□□□ 0.65
CCDC9-201ENST00000221922 RAB13P51153 203 aa19.11■□□□□ 0.65
CCDC9-201ENST00000221922 PIGYQ3MUY2 71 aa19.11■□□□□ 0.65
CCDC9-201ENST00000221922 Q6ZRG5 221 aa19.11■□□□□ 0.65
CCDC9-201ENST00000221922 RTN4IP1Q8WWV3 396 aaPredicted RBP19.11■□□□□ 0.65
CCDC9-201ENST00000221922 APH1AQ96BI3 265 aa19.11■□□□□ 0.65
CCDC9-201ENST00000221922 SUCNR1Q9BXA5 334 aa19.11■□□□□ 0.65
CCDC9-201ENST00000221922 ARID1AO14497 2285 aa19.11■□□□□ 0.65
CCDC9-201ENST00000221922 ARGFXA6NJG6 315 aa19.1■□□□□ 0.65
CCDC9-201ENST00000221922 C9JQL5 133 aa19.1■□□□□ 0.65
CCDC9-201ENST00000221922 PDCD6O75340 191 aa19.1■□□□□ 0.65
CCDC9-201ENST00000221922 OR5AC1P0C628 307 aa19.1■□□□□ 0.65
CCDC9-201ENST00000221922 FTH1P19P0C7X4 201 aa19.1■□□□□ 0.65
CCDC9-201ENST00000221922 NFYBP25208 207 aa19.1■□□□□ 0.65
CCDC9-201ENST00000221922 MALLQ13021 153 aa19.1■□□□□ 0.65
CCDC9-201ENST00000221922 ABCA11PQ4W5N1 156 aa19.1■□□□□ 0.65
CCDC9-201ENST00000221922 DEFB124Q8NES8 71 aa19.1■□□□□ 0.65
CCDC9-201ENST00000221922 TOMM40LQ969M1 308 aa19.1■□□□□ 0.65
CCDC9-201ENST00000221922 ERGIC1Q969X5 290 aa19.1■□□□□ 0.65
CCDC9-201ENST00000221922 C18orf12Q96KH6 178 aa19.1■□□□□ 0.65
CCDC9-201ENST00000221922 CACNA1HO95180 2353 aa19.1■□□□□ 0.65
CCDC9-201ENST00000221922 RBM11P57052 281 aaKnown RBP19.1■□□□□ 0.65
CCDC9-201ENST00000221922 SP6Q3SY56 376 aa19.1■□□□□ 0.65
CCDC9-201ENST00000221922 DMBX1Q8NFW5 382 aa19.1■□□□□ 0.65
CCDC9-201ENST00000221922 MARS2Q96GW9 593 aaKnown RBP19.1■□□□□ 0.65
CCDC9-201ENST00000221922 REPIN1Q9BWE0 567 aaKnown RBP19.1■□□□□ 0.65
CCDC9-201ENST00000221922 A0A096LPE4 126 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 A0A1W2PPZ6 126 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 CD80P33681 288 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 ARR3P36575 388 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 SLC10A1Q14973 349 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 TGIF1Q15583 401 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 FAM76BQ5HYJ3 339 aa19.09■□□□□ 0.65
CCDC9-201ENST00000221922 C9orf135Q5VTT2 229 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms