RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 OR1F12Q8NHA8 337 aa12.67□□□□□ -0.38
SCARB2-221ENST00000640341 SFT2D1Q8WV19 159 aa12.67□□□□□ -0.38
SCARB2-221ENST00000640341 HS3ST3B1Q9Y662 390 aa12.67□□□□□ -0.38
SCARB2-221ENST00000640341 IGLV3-32A0A0A0MS00 114 aa12.67□□□□□ -0.38
SCARB2-221ENST00000640341 BORCS7-ASMTA0A0B4J1R7 106 aa12.67□□□□□ -0.38
SCARB2-221ENST00000640341 FOXI3A8MTJ6 420 aaPredicted RBP12.67□□□□□ -0.38
SCARB2-221ENST00000640341 RFPL3SP0C7P2 107 aa12.67□□□□□ -0.38
SCARB2-221ENST00000640341 ZNF14P17017 642 aaPredicted RBP12.67□□□□□ -0.38
SCARB2-221ENST00000640341 ARL6IP1Q15041 203 aa12.67□□□□□ -0.38
SCARB2-221ENST00000640341 PPA1Q15181 289 aa12.67□□□□□ -0.38
SCARB2-221ENST00000640341 BTNL8Q6UX41 500 aa12.67□□□□□ -0.38
SCARB2-221ENST00000640341 OSR2Q8N2R0 312 aa12.67□□□□□ -0.38
SCARB2-221ENST00000640341 ABHD3Q8WU67 409 aa12.67□□□□□ -0.38
SCARB2-221ENST00000640341 DUSP23Q9BVJ7 150 aa12.67□□□□□ -0.38
SCARB2-221ENST00000640341 TM2D1Q9BX74 207 aa12.67□□□□□ -0.38
SCARB2-221ENST00000640341 ZNF700Q9H0M5 742 aa12.67□□□□□ -0.38
SCARB2-221ENST00000640341 SMCO4Q9NRQ5 59 aa12.67□□□□□ -0.38
SCARB2-221ENST00000640341 A0A1W2PPH5 198 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 FAM24AA6NFZ4 105 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 CDRT15L2A8MXV6 281 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 UMODP07911 640 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 GLP1RP43220 463 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 RAB5BP61020 215 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 CNN3Q15417 329 aaKnown RBP12.66□□□□□ -0.38
SCARB2-221ENST00000640341 SURF2Q15527 256 aaPredicted RBP12.66□□□□□ -0.38
SCARB2-221ENST00000640341 LPAL2Q16609 132 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 RBMS3Q6XE24 437 aaKnown RBP12.66□□□□□ -0.38
SCARB2-221ENST00000640341 FAM24BQ8N5W8 94 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 ZNF845Q96IR2 970 aaPredicted RBP12.66□□□□□ -0.38
SCARB2-221ENST00000640341 SLC7A11Q9UPY5 501 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 APOC1P02654 83 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 LYL1P12980 280 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 AADACP22760 399 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 MRPL14Q6P1L8 145 aaKnown RBP12.66□□□□□ -0.38
SCARB2-221ENST00000640341 CALHM1Q8IU99 346 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 SLC35G3Q8N808 338 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 ZFP62Q8NB50 900 aaPredicted RBP12.66□□□□□ -0.38
SCARB2-221ENST00000640341 NANPQ8TBE9 248 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 UBE2J1Q9Y385 318 aaPredicted RBP12.66□□□□□ -0.38
SCARB2-221ENST00000640341 NBEAQ8NFP9 2946 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 IGHV1-45A0A0A0MS14 117 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 E5RGE8 158 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 CST7O76096 145 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 POLR2GP62487 172 aaKnown RBP eCLIP12.66□□□□□ -0.38
SCARB2-221ENST00000640341 PSG4Q00888 419 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 MALLQ13021 153 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 RHBDD1Q8TEB9 315 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 TMEM54Q969K7 222 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 TP53RKQ96S44 253 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 NSG2Q9Y328 171 aa12.66□□□□□ -0.38
SCARB2-221ENST00000640341 DIDO1Q9BTC0 2240 aaKnown RBP12.66□□□□□ -0.38
SCARB2-221ENST00000640341 SPTBN2O15020 2390 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 LY6G6EA0A0G2JKS1 128 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 NUDT19A8MXV4 375 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 C1orf196B1AJZ1 125 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 UMAD1C9J7I0 102 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 TOX3O15405 576 aaPredicted RBP12.65□□□□□ -0.38
SCARB2-221ENST00000640341 VAMP5O95183 116 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 PPP1CCP36873 323 aaKnown RBP12.65□□□□□ -0.38
SCARB2-221ENST00000640341 HOXA1P49639 335 aaPredicted RBP12.65□□□□□ -0.38
SCARB2-221ENST00000640341 GNMTQ14749 295 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 C10orf128Q5T292 105 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 P4HA3Q7Z4N8 544 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 PCED1AQ9H1Q7 454 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 ZNF286AQ9HBT8 521 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 PROK2Q9HC23 129 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 PARP11Q9NR21 331 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 LUZP4Q9P127 313 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 U3KQA8 63 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 IGHV3-64DA0A0J9YX35 117 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 C7orf77A4D0Y5 90 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 ST8SIA3O43173 380 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 P04436 131 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 JMJD7P0C870 316 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 TMEM187Q14656 261 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 FAM27BQ5VT28 67 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 RNF138Q8WVD3 245 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 FOXB1Q99853 325 aa12.65□□□□□ -0.38
SCARB2-221ENST00000640341 USB1Q9BQ65 265 aaKnown RBP12.65□□□□□ -0.38
SCARB2-221ENST00000640341 A0A1W2PPE2 198 aa12.65□□□□□ -0.39
SCARB2-221ENST00000640341 COLCA2A8K830 154 aa12.65□□□□□ -0.39
SCARB2-221ENST00000640341 ZNF587BE7ETH6 402 aa12.65□□□□□ -0.39
SCARB2-221ENST00000640341 H3BP45 60 aa12.65□□□□□ -0.39
SCARB2-221ENST00000640341 SSSCA1O60232 199 aa12.65□□□□□ -0.39
SCARB2-221ENST00000640341 EIF3GO75821 320 aaKnown RBP eCLIP12.65□□□□□ -0.39
SCARB2-221ENST00000640341 COX6A1P12074 109 aa12.65□□□□□ -0.39
SCARB2-221ENST00000640341 CHATP28329 748 aa12.65□□□□□ -0.39
SCARB2-221ENST00000640341 C10orf91Q5T1B1 145 aa12.65□□□□□ -0.39
SCARB2-221ENST00000640341 ZNF611Q8N823 705 aa12.65□□□□□ -0.39
SCARB2-221ENST00000640341 SAP25Q8TEE9 199 aa12.65□□□□□ -0.39
SCARB2-221ENST00000640341 SPSB1Q96BD6 273 aa12.65□□□□□ -0.39
SCARB2-221ENST00000640341 ABHD14AQ9BUJ0 271 aa12.65□□□□□ -0.39
SCARB2-221ENST00000640341 KCNJ16Q9NPI9 418 aa12.65□□□□□ -0.39
SCARB2-221ENST00000640341 IL36RNQ9UBH0 155 aa12.65□□□□□ -0.39
SCARB2-221ENST00000640341 CACFD1Q9UGQ2 172 aa12.65□□□□□ -0.39
SCARB2-221ENST00000640341 ATXN7O15265 892 aaPredicted RBP12.64□□□□□ -0.39
SCARB2-221ENST00000640341 CD5P06127 495 aa12.64□□□□□ -0.39
SCARB2-221ENST00000640341 TCN2P20062 427 aa12.64□□□□□ -0.39
SCARB2-221ENST00000640341 EPHA1P21709 976 aa12.64□□□□□ -0.39
SCARB2-221ENST00000640341 CTSSP25774 331 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms