RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 SDSLQ96GA7 329 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 MED30Q96HR3 178 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 C1orf147Q96MC9 270 aaPredicted RBP10.96□□□□□ -0.65
GTF3A-209ENST00000640289 UQCC2Q9BRT2 126 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 CENPOQ9BU64 300 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 KCNK15Q9H427 330 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 MMP26Q9NRE1 261 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 YAE1D1Q9NRH1 226 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 HIF1ANQ9NWT6 349 aa10.96□□□□□ -0.65
GTF3A-209ENST00000640289 C22orf46C9J442 243 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 SIRPB1O00241 398 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 NDUFB3O43676 98 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 CSTBP04080 98 aaKnown RBP10.95□□□□□ -0.66
GTF3A-209ENST00000640289 CPT2P23786 658 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 HTR2CP28335 458 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 NPY4RP50391 375 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 FGF12P61328 243 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 LSM3P62310 102 aaKnown RBP10.95□□□□□ -0.66
GTF3A-209ENST00000640289 ZNF146Q15072 292 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 PIGYQ3MUY2 71 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 SPIN3Q5JUX0 258 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 FAM166AQ6J272 317 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 METAP1DQ6UB28 335 aaPredicted RBP10.95□□□□□ -0.66
GTF3A-209ENST00000640289 FIP1L1Q6UN15 594 aaKnown RBP10.95□□□□□ -0.66
GTF3A-209ENST00000640289 GLCCI1Q86VQ1 547 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 NR2C2APQ86WQ0 139 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 ASCC1Q8N9N2 400 aaKnown RBP10.95□□□□□ -0.66
GTF3A-209ENST00000640289 Q8NFD4 153 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 TBC1D15Q8TC07 691 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 TMEM186Q96B77 213 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 FUNDC2Q9BWH2 189 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 RHOFQ9HBH0 211 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 PLGRKTQ9HBL7 147 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 IL36GQ9NZH8 169 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 SLC25A10Q9UBX3 287 aaPredicted RBP10.95□□□□□ -0.66
GTF3A-209ENST00000640289 OR5V1Q9UGF6 321 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 V9GY05 133 aa10.95□□□□□ -0.66
GTF3A-209ENST00000640289 TMEM82A0PJX8 343 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 SLC17A2O00624 439 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 PDCD5O14737 125 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 SLC22A1O15245 554 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 AIREO43918 545 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 ZNF737O75373 536 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 OR2H2O95918 312 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 CHRM2P08172 466 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 CLEC2LP0C7M8 214 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 NDUFB7P17568 137 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 RAB3BP20337 219 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 ALDH3B2P48448 385 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 CAPZA1P52907 286 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 DVL1P1P54792 670 aaPredicted RBP10.94□□□□□ -0.66
GTF3A-209ENST00000640289 CLDN12P56749 244 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 PAX2Q02962 417 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 SCN1BQ07699 218 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 P2RY14Q15391 338 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 LRRC10Q5BKY1 277 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 HES5Q5TA89 166 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 OR10K2Q6IF99 312 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 Q6P435 159 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 BTN2A1Q7KYR7 527 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 OSR2Q8N2R0 312 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 ZNF561Q8N587 486 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 TMEM104Q8NE00 496 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 OR51T1Q8NGJ9 327 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 OR6M1Q8NGM8 313 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 FAM46BQ96A09 425 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 SLC25A28Q96A46 364 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 KCTD7Q96MP8 289 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 NAA50Q9GZZ1 169 aaKnown RBP10.94□□□□□ -0.66
GTF3A-209ENST00000640289 BANF2Q9H503 90 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 ZNF581Q9P0T4 197 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 KCNS2Q9ULS6 477 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 ST3GAL6Q9Y274 331 aa10.94□□□□□ -0.66
GTF3A-209ENST00000640289 POLR3KQ9Y2Y1 108 aaPredicted RBP10.94□□□□□ -0.66
GTF3A-209ENST00000640289 CELSR1Q9NYQ6 3014 aa10.93□□□□□ -0.66
GTF3A-209ENST00000640289 LOC105371242A0A075B767 164 aa10.93□□□□□ -0.66
GTF3A-209ENST00000640289 TRAV20A0A0B4J274 112 aa10.93□□□□□ -0.66
GTF3A-209ENST00000640289 A0A0G2JK05 382 aa10.93□□□□□ -0.66
GTF3A-209ENST00000640289 A8MV72 311 aaPredicted RBP10.93□□□□□ -0.66
GTF3A-209ENST00000640289 SH2D1BO14796 132 aa10.93□□□□□ -0.66
GTF3A-209ENST00000640289 PSPNO60542 156 aa10.93□□□□□ -0.66
GTF3A-209ENST00000640289 ZNF780AO75290 641 aaPredicted RBP10.93□□□□□ -0.66
GTF3A-209ENST00000640289 CRTAPO75718 401 aaPredicted RBP10.93□□□□□ -0.66
GTF3A-209ENST00000640289 VSIG8P0DPA2 414 aa10.93□□□□□ -0.66
GTF3A-209ENST00000640289 ZNF44P15621 663 aa10.93□□□□□ -0.66
GTF3A-209ENST00000640289 SDC2P34741 201 aa10.93□□□□□ -0.66
GTF3A-209ENST00000640289 BMXP51813 675 aa10.93□□□□□ -0.66
GTF3A-209ENST00000640289 CAV3P56539 151 aa10.93□□□□□ -0.66
GTF3A-209ENST00000640289 RBM11P57052 281 aaKnown RBP10.93□□□□□ -0.66
GTF3A-209ENST00000640289 MXD1Q05195 221 aa10.93□□□□□ -0.66
GTF3A-209ENST00000640289 TIMM50Q3ZCQ8 353 aa10.93□□□□□ -0.66
GTF3A-209ENST00000640289 FAHD2BQ6P2I3 314 aaPredicted RBP10.93□□□□□ -0.66
GTF3A-209ENST00000640289 GDPGP1Q6ZNW5 385 aa10.93□□□□□ -0.66
GTF3A-209ENST00000640289 C17orf107Q6ZR85 190 aa10.93□□□□□ -0.66
GTF3A-209ENST00000640289 H1FXQ92522 213 aaKnown RBP10.93□□□□□ -0.66
GTF3A-209ENST00000640289 DACT3Q96B18 629 aaPredicted RBP10.93□□□□□ -0.66
GTF3A-209ENST00000640289 FAHD2AQ96GK7 314 aa10.93□□□□□ -0.66
GTF3A-209ENST00000640289 CHST6Q9GZX3 395 aa10.93□□□□□ -0.66
GTF3A-209ENST00000640289 SHARPINQ9H0F6 387 aa10.93□□□□□ -0.66
GTF3A-209ENST00000640289 SEBOXQ9HB31 216 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms