RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 PLIN4Q96Q06 1357 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 TRAV36DV7A0A075B6V5 113 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 EEF1E1O43324 174 aaKnown RBP3.81□□□□□ -1.8
SCN3A-209ENST00000639244 EIF4E2O60573 245 aaKnown RBP3.81□□□□□ -1.8
SCN3A-209ENST00000639244 NGFRP08138 427 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 SPINK8P0C7L1 97 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 FABP2P12104 132 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 CD40P25942 277 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 LHX2P50458 406 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 RPS25P62851 125 aaKnown RBP3.81□□□□□ -1.8
SCN3A-209ENST00000639244 PLP2Q04941 152 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 SLC25A52Q3SY17 297 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 FAM182AQ5T1J6 154 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 GLB1LQ6UWU2 654 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 LIAT1Q6ZQX7 453 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 NAT16Q8N8M0 369 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 NPEPL1Q8NDH3 523 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 KIR2DL5BQ8NHK3 375 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 ACER1Q8TDN7 264 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 CYB5D2Q8WUJ1 264 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 SAMD10Q9BYL1 202 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 ACP6Q9NPH0 428 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 FBLN5Q9UBX5 448 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 SH2B3Q9UQQ2 575 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 ZNF646O15015 1829 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-209ENST00000639244 C1QTNF9BB2RNN3 333 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 ATP1B2P14415 290 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-209ENST00000639244 CXCL2P19875 107 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 PSMB1P20618 241 aaKnown RBP3.81□□□□□ -1.8
SCN3A-209ENST00000639244 GLRXP35754 106 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 SLC35B1P78383 322 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 LRRC10Q5BKY1 277 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 JOSD2Q8TAC2 188 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 GPR148Q8TDV2 347 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 CCDC140Q96MF4 163 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 MGLLQ99685 303 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 CXorf36Q9H7Y0 433 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 KLHL13Q9P2N7 655 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 B4GALT7Q9UBV7 327 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 PRO0628Q9UI54 55 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 WNK2Q9Y3S1 2297 aa3.81□□□□□ -1.8
SCN3A-209ENST00000639244 DLEC1Q9Y238 1755 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 ABCA1O95477 2261 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 C8orf88P0DMB2 117 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 PRPH2P23942 346 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 UBE2MP61081 183 aaKnown RBP3.8□□□□□ -1.8
SCN3A-209ENST00000639244 B3GALNT2Q8NCR0 500 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 KLHDC7BQ96G42 594 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 C16orf70Q9BSU1 422 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 AMBNQ9NP70 447 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 WASHC3Q9Y3C0 194 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 LOC102723996A0A087X1L8 192 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 C2orf72A6NCS6 295 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 TBL1XO60907 577 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 VTNP04004 478 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 KLK1P06870 262 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 WASP42768 502 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 P2RY1P47900 373 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 ZNF157P51786 506 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-209ENST00000639244 ZNF658BQ4V348 819 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-209ENST00000639244 TMEM196Q5HYL7 178 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 PWWP2BQ6NUJ5 590 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 PELI3Q8N2H9 469 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 ZNF676Q8N7Q3 588 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 JMJD8Q96S16 334 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 CHRNA10Q9GZZ6 450 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 TOPAZ1Q8N9V7 1692 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 USP32Q8NFA0 1604 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 QSER1Q2KHR3 1735 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 TNFSF11O14788 317 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 IL18BPO95998 194 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 HOXD9P28356 352 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-209ENST00000639244 PAX9P55771 341 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 SLC25A26Q70HW3 274 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 OCC1Q8TAD7 63 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 NTMQ9P121 344 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 SIGLEC9Q9Y336 463 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 SAMD9LQ8IVG5 1584 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 DDX60Q8IY21 1712 aaKnown RBP3.8□□□□□ -1.8
SCN3A-209ENST00000639244 A0A1W2PPM1 405 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 A8MZ25 164 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 PTPRNQ16849 979 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 OLFML2AQ68BL7 652 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 IL22RA1Q8N6P7 574 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 C11orf44Q8N8P7 122 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 OR1B1Q8NGR6 318 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 SLAMF6Q96DU3 332 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 SCML2Q9UQR0 700 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 ZNF407Q9C0G0 2248 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 SBF2Q86WG5 1849 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 RIMBP3CA6NJZ7 1639 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 RIMBP3BA6NNM3 1639 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 A0A1W2PRE2 83 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 GPR25O00155 361 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 SCG5P05408 212 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 ADCYAP1P18509 176 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 NXPH1P58417 271 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 ERVK11-1P61568 191 aa3.8□□□□□ -1.8
SCN3A-209ENST00000639244 TMEM173Q86WV6 379 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms