RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 FAAHO00519 579 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 ABCD4O14678 606 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 LSM1O15116 133 aaKnown RBP1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 SCN2BO60939 215 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 REM1O75628 298 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 UPK3AO75631 287 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 LYZL6O75951 148 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 ATP5LO75964 103 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 LY6HO94772 140 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 IGKV3-15P01624 115 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 RBP1P09455 135 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 PPIAL4FP0DN26 164 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 ETS2P15036 469 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 NTSP30990 170 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 IL2RGP31785 369 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 MPIP34949 423 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 LEPP41159 167 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 EIF1P41567 113 aaKnown RBP1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 CRYBB2P43320 205 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 KIR2DS2P43631 304 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 PPOXP50336 477 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 P2RX1P51575 399 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 NCBP2P52298 156 aaKnown RBP eCLIP1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 EFNA4P52798 201 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 SLC25A1P53007 311 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 PSMD4P55036 377 aaKnown RBP1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 PLTPP55058 493 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 PKNOX1P55347 436 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 DNAJB13P59910 316 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 CXCL6P80162 114 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 CAV1Q03135 178 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 CHRNB3Q05901 458 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 CD47Q08722 323 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 STX5Q13190 355 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 ASAH1Q13510 395 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF141Q15928 474 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 PRR4Q16378 134 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 GABRA6Q16445 453 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 TRIM16LQ309B1 348 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 NDUFAF6Q330K2 333 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 HIGD2BQ4VC39 106 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 PAN3Q58A45 887 aaKnown RBP1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 HBMQ6B0K9 141 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 NOXRED1Q6NXP6 359 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 C3orf33Q6P1S2 294 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 CLEC2AQ6UVW9 174 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 BHLHA15Q7RTS1 189 aaPredicted RBP1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 MTERF4Q7Z6M4 381 aaKnown RBP1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 P2RY8Q86VZ1 359 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 CTAGE3PQ8IX95 158 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 RIMKLAQ8IXN7 391 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 MUC15Q8N387 334 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 C17orf78Q8N4C9 275 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 ZIC4Q8N9L1 334 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 CDRT4Q8N9R6 151 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 GATSQ8NAP1 163 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 SFXN5Q8TD22 340 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 ST8SIA1Q92185 356 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 CIDECQ96AQ7 238 aaPredicted RBP1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 TIMD4Q96H15 378 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF75AQ96N20 296 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 OR5M11Q96RB7 305 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 DHRS9Q9BPW9 319 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 TBL1XR1Q9BZK7 514 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 PLA2G12AQ9BZM1 189 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 CHIAQ9BZP6 476 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 BPESC1Q9GZL8 116 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 NMUR2Q9GZQ4 415 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 PIGUQ9H490 435 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 TMEM185BQ9H7F4 350 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 PTGES2Q9H7Z7 377 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 NIPAL2Q9H841 368 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 EML4Q9HC35 981 aaKnown RBP1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 MIEF1Q9NQG6 463 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 UBQLN4Q9NRR5 601 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 DDX18Q9NVP1 670 aaKnown RBP1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 FAIMQ9NVQ4 179 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 SLC2A8Q9NY64 477 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 AHSPQ9NZD4 102 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 TMEM216Q9P0N5 145 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 OR1A1Q9P1Q5 309 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 RABL2AQ9UBK7 228 aaPredicted RBP1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 PYCARDQ9ULZ3 195 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 STK38LQ9Y2H1 464 aa1.84□□□□□ -2.11
SMARCB1-208ENST00000634926 DSPPQ9NZW4 1301 aa1.84□□□□□ -2.12
SMARCB1-208ENST00000634926 DYNC2H1Q8NCM8 4307 aaKnown RBP1.84□□□□□ -2.12
SMARCB1-208ENST00000634926 SACSQ9NZJ4 4579 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 RYR2Q92736 4967 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 IGHV1-18A0A0C4DH31 117 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 A0A1B0GUS0 222 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 GNG14A0A1W2PPG7 69 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 BTBD17A6NE02 478 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 CCDC182A6NF36 153 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 GJE1A6NN92 205 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 TRIM49D1C9J1S8 452 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 FTCDNL1E5RQL4 147 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 ATP6V1G2-DDX39BF2Z307 99 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 H3BQF6 201 aa1.83□□□□□ -2.12
SMARCB1-208ENST00000634926 SCAMP2O15127 329 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms