RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 ZNF43P17038 809 aa12.13□□□□□ -0.47
UBE3A-209ENST00000625778 ATP6V0CP27449 155 aa12.13□□□□□ -0.47
UBE3A-209ENST00000625778 BPIFB3P59826 476 aa12.13□□□□□ -0.47
UBE3A-209ENST00000625778 RND3P61587 244 aa12.13□□□□□ -0.47
UBE3A-209ENST00000625778 DMRTA1Q5VZB9 504 aa12.13□□□□□ -0.47
UBE3A-209ENST00000625778 SCRT1Q9BWW7 348 aa12.13□□□□□ -0.47
UBE3A-209ENST00000625778 TUBA4BQ9H853 241 aa12.13□□□□□ -0.47
UBE3A-209ENST00000625778 BLACEA4D250 179 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 ZNF587BE7ETH6 402 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 IGHV4-34P06331 123 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 NPSP0C0P6 89 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 TUBG1P23258 451 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 ZNF41P51814 821 aaPredicted RBP12.12□□□□□ -0.47
UBE3A-209ENST00000625778 RNF151Q2KHN1 245 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 KHDC3LQ587J8 217 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 ZNF574Q6ZN55 896 aaPredicted RBP12.12□□□□□ -0.47
UBE3A-209ENST00000625778 OR1N1Q8NGS0 311 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 MUCL1Q96DR8 90 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 WFIKKN1Q96NZ8 548 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 CHST5Q9GZS9 411 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 CBLN4Q9NTU7 201 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 LIPT2A6NK58 231 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 CEACAM18A8MTB9 384 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 HIST1H2BKO60814 126 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 HIST1H2BJP06899 126 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 CTSDP07339 412 aaPredicted RBP12.12□□□□□ -0.47
UBE3A-209ENST00000625778 HIST1H2BOP23527 126 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 HIST1H2BBP33778 126 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 TSPAN7P41732 249 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 HIST1H2BDP58876 126 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 DCAF7P61962 342 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 HIST1H2BCP62807 126 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 EWSR1Q01844 656 aaKnown RBP eCLIP12.12□□□□□ -0.47
UBE3A-209ENST00000625778 HIST2H2BEQ16778 126 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 TMEM176BQ3YBM2 270 aaPredicted RBP12.12□□□□□ -0.47
UBE3A-209ENST00000625778 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.12□□□□□ -0.47
UBE3A-209ENST00000625778 HIST1H2BHQ93079 126 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 SNX22Q96L94 193 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 HIST1H2BNQ99877 126 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 HIST1H2BMQ99879 126 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 RBM24Q9BX46 236 aaKnown RBP12.12□□□□□ -0.47
UBE3A-209ENST00000625778 NAA60Q9H7X0 242 aa12.12□□□□□ -0.47
UBE3A-209ENST00000625778 CLDN17P56750 224 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 RAB1AP62820 205 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 MAML2Q8IZL2 1156 aaPredicted RBP12.11□□□□□ -0.47
UBE3A-209ENST00000625778 MRPL37Q9BZE1 423 aaKnown RBP12.11□□□□□ -0.47
UBE3A-209ENST00000625778 SLC2A9Q9NRM0 540 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 TUBD1Q9UJT1 453 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 CELSR3Q9NYQ7 3312 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 CCDC187A0A096LP49 1063 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 ZFP92A6NM28 416 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 SERPINE3A8MV23 424 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 H3BMH7 237 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 ZNHIT1O43257 154 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 EFNA2O43921 213 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 HIST1H1BP16401 226 aaKnown RBP12.11□□□□□ -0.47
UBE3A-209ENST00000625778 RAB11AP62491 216 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 VAMP2P63027 116 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 PRAMEF20Q5VT98 475 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 NOXO1Q8NFA2 376 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 HAS2Q92819 552 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 LYZL4Q96KX0 146 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 NIPSNAP3BQ9BS92 247 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 METTL7AQ9H8H3 244 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 B3GAT1Q9P2W7 334 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 NKX2-6A6NCS4 301 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 GEMIN2O14893 280 aaKnown RBP12.11□□□□□ -0.47
UBE3A-209ENST00000625778 SPINK2P20155 84 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 DUSP1P28562 367 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 OR1D5P58170 312 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 RPL23AP62750 156 aaKnown RBP12.11□□□□□ -0.47
UBE3A-209ENST00000625778 PIGYQ3MUY2 71 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 THEM4Q5T1C6 240 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 THNSL2Q86YJ6 484 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 COMMD1Q8N668 190 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 OR1L3Q8NH93 324 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 GNG13Q9P2W3 67 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 WSB1Q9Y6I7 421 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 PTPRSQ13332 1948 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 RALGAPA1Q6GYQ0 2036 aa12.11□□□□□ -0.47
UBE3A-209ENST00000625778 C2orf16Q68DN1 1984 aa12.1□□□□□ -0.47
UBE3A-209ENST00000625778 A0A1W2PQD3 144 aa12.1□□□□□ -0.47
UBE3A-209ENST00000625778 HSPB6O14558 160 aa12.1□□□□□ -0.47
UBE3A-209ENST00000625778 IFNA10P01566 189 aa12.1□□□□□ -0.47
UBE3A-209ENST00000625778 CSNK1A1P48729 337 aa12.1□□□□□ -0.47
UBE3A-209ENST00000625778 HERV-K104P61576 105 aa12.1□□□□□ -0.47
UBE3A-209ENST00000625778 TRA2AQ13595 282 aaKnown RBP eCLIP12.1□□□□□ -0.473e-7■□□□□ 10
UBE3A-209ENST00000625778 C1orf53Q5VUE5 145 aa12.1□□□□□ -0.47
UBE3A-209ENST00000625778 SLC35G3Q8N808 338 aa12.1□□□□□ -0.47
UBE3A-209ENST00000625778 NECAP1Q8NC96 275 aa12.1□□□□□ -0.47
UBE3A-209ENST00000625778 OR5C1Q8NGR4 320 aa12.1□□□□□ -0.47
UBE3A-209ENST00000625778 LYPD6BQ8NI32 183 aa12.1□□□□□ -0.47
UBE3A-209ENST00000625778 NEU1Q99519 415 aa12.1□□□□□ -0.47
UBE3A-209ENST00000625778 GINS3Q9BRX5 216 aa12.1□□□□□ -0.47
UBE3A-209ENST00000625778 PLEK2Q9NYT0 353 aa12.1□□□□□ -0.47
UBE3A-209ENST00000625778 NCOA6Q14686 2063 aaPredicted RBP12.1□□□□□ -0.47
UBE3A-209ENST00000625778 FOLR1P15328 257 aa12.1□□□□□ -0.47
UBE3A-209ENST00000625778 EPHA1P21709 976 aa12.1□□□□□ -0.47
UBE3A-209ENST00000625778 TNFRSF9Q07011 255 aa12.1□□□□□ -0.47
UBE3A-209ENST00000625778 TMEM187Q14656 261 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms