RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 M1APQ8TC57 530 aa12.3□□□□□ -0.44
LDB3-209ENST00000623056 PGAM5Q96HS1 289 aa12.3□□□□□ -0.44
LDB3-209ENST00000623056 PACRGQ96M98 296 aaPredicted RBP12.3□□□□□ -0.44
LDB3-209ENST00000623056 FAAP24Q9BTP7 215 aa12.3□□□□□ -0.44
LDB3-209ENST00000623056 SMOC1Q9H4F8 434 aa12.3□□□□□ -0.44
LDB3-209ENST00000623056 THADAQ6YHU6 1953 aa12.3□□□□□ -0.44
LDB3-209ENST00000623056 CCDC187A0A096LP49 1063 aa12.29□□□□□ -0.44
LDB3-209ENST00000623056 SPTY2D1-AS1A0A0U1RR47 76 aa12.29□□□□□ -0.44
LDB3-209ENST00000623056 ZNF133P52736 654 aaPredicted RBP12.29□□□□□ -0.44
LDB3-209ENST00000623056 ZNF506Q5JVG8 444 aa12.29□□□□□ -0.44
LDB3-209ENST00000623056 SP5Q6BEB4 398 aaPredicted RBP12.29□□□□□ -0.44
LDB3-209ENST00000623056 SLC35E3Q7Z769 313 aa12.29□□□□□ -0.44
LDB3-209ENST00000623056 DTX1Q86Y01 620 aa12.29□□□□□ -0.44
LDB3-209ENST00000623056 UEVLDQ8IX04 471 aa12.29□□□□□ -0.44
LDB3-209ENST00000623056 Q96M66 194 aa12.29□□□□□ -0.44
LDB3-209ENST00000623056 SSX3Q99909 188 aa12.29□□□□□ -0.44
LDB3-209ENST00000623056 UCK1Q9HA47 277 aa12.29□□□□□ -0.44
LDB3-209ENST00000623056 FAM230AA0A1W2PPH8 454 aa12.29□□□□□ -0.44
LDB3-209ENST00000623056 TERTO14746 1132 aaKnown RBP12.29□□□□□ -0.44
LDB3-209ENST00000623056 PITX3O75364 302 aa12.29□□□□□ -0.44
LDB3-209ENST00000623056 PAX1P15863 534 aa12.29□□□□□ -0.44
LDB3-209ENST00000623056 GRB2P62993 217 aaKnown RBP12.29□□□□□ -0.44
LDB3-209ENST00000623056 OR11L1Q8NGX0 322 aa12.29□□□□□ -0.44
LDB3-209ENST00000623056 HAS2Q92819 552 aa12.29□□□□□ -0.44
LDB3-209ENST00000623056 FAM210BQ96KR6 192 aa12.29□□□□□ -0.44
LDB3-209ENST00000623056 SLC25A31Q9H0C2 315 aa12.29□□□□□ -0.44
LDB3-209ENST00000623056 C11orf1Q9H5F2 150 aa12.29□□□□□ -0.44
LDB3-209ENST00000623056 VSTM2BA6NLU5 285 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 PHF1O43189 567 aaPredicted RBP12.28□□□□□ -0.44
LDB3-209ENST00000623056 EFNA2O43921 213 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 IL2RGP31785 369 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 FBXW4P57775 412 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 C4orf17Q53FE4 359 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.28□□□□□ -0.44
LDB3-209ENST00000623056 SLC25A47Q6Q0C1 308 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 D2HGDHQ8N465 521 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 SLC35G3Q8N808 338 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 TMEM171Q8WVE6 324 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 MISP3Q96FF7 219 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 HIST1H2BLQ99880 126 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 ZNF581Q9P0T4 197 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 IGLV3-1P01715 115 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 OPN1LWP04000 364 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 QDPRP09417 244 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 THEGLP0DJG4 465 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 FOSL2P15408 326 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 OMGP23515 440 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 NOVA1P51513 510 aaKnown RBP12.28□□□□□ -0.44
LDB3-209ENST00000623056 HLA-DRB3P79483 266 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 MYBPHQ13203 477 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 SLC22A25Q6T423 547 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 CPEB2Q7Z5Q1 589 aaKnown RBP12.28□□□□□ -0.44
LDB3-209ENST00000623056 DPPA2Q7Z7J5 298 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 OR5R1Q8NH85 324 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 CLDND2Q8NHS1 167 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 MVB12AQ96EY5 273 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 C2orf88Q9BSF0 95 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 CYP8B1Q9UNU6 501 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 V9GYS6 101 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 RTTNQ86VV8 2226 aa12.28□□□□□ -0.44
LDB3-209ENST00000623056 DHRS3O75911 302 aa12.27□□□□□ -0.44
LDB3-209ENST00000623056 ONECUT2O95948 504 aa12.27□□□□□ -0.44
LDB3-209ENST00000623056 IGHV4-34P06331 123 aa12.27□□□□□ -0.44
LDB3-209ENST00000623056 C17orf67Q0P5P2 114 aa12.27□□□□□ -0.44
LDB3-209ENST00000623056 AKR1C8PQ5T2L2 129 aa12.27□□□□□ -0.44
LDB3-209ENST00000623056 TMEM92Q6UXU6 159 aa12.27□□□□□ -0.44
LDB3-209ENST00000623056 MEX3BQ6ZN04 569 aaKnown RBP12.27□□□□□ -0.44
LDB3-209ENST00000623056 C1orf87Q8N0U7 546 aa12.27□□□□□ -0.44
LDB3-209ENST00000623056 PP6455Q8WZ26 134 aa12.27□□□□□ -0.44
LDB3-209ENST00000623056 LRRC61Q9BV99 259 aa12.27□□□□□ -0.44
LDB3-209ENST00000623056 SLC7A11Q9UPY5 501 aa12.27□□□□□ -0.44
LDB3-209ENST00000623056 SMCO3A2RU48 225 aa12.27□□□□□ -0.45
LDB3-209ENST00000623056 NKX2-6A6NCS4 301 aa12.27□□□□□ -0.45
LDB3-209ENST00000623056 MKRN2OSH3BPM6 223 aa12.27□□□□□ -0.45
LDB3-209ENST00000623056 HSPA12AO43301 675 aa12.27□□□□□ -0.45
LDB3-209ENST00000623056 TRAF3IP2O43734 574 aaPredicted RBP12.27□□□□□ -0.45
LDB3-209ENST00000623056 SPCS3P61009 180 aa12.27□□□□□ -0.45
LDB3-209ENST00000623056 TAF9Q16594 264 aa12.27□□□□□ -0.45
LDB3-209ENST00000623056 LANCL3Q6ZV70 420 aa12.27□□□□□ -0.45
LDB3-209ENST00000623056 SUMF1Q8NBK3 374 aa12.27□□□□□ -0.45
LDB3-209ENST00000623056 DYRK2Q92630 601 aa12.27□□□□□ -0.45
LDB3-209ENST00000623056 TP53RKQ96S44 253 aa12.27□□□□□ -0.45
LDB3-209ENST00000623056 ANGPTL4Q9BY76 406 aa12.27□□□□□ -0.45
LDB3-209ENST00000623056 CRLF2Q9HC73 371 aa12.27□□□□□ -0.45
LDB3-209ENST00000623056 PIGLQ9Y2B2 252 aa12.27□□□□□ -0.45
LDB3-209ENST00000623056 PHOX2AO14813 284 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 PGA5P0DJD9 388 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 DTYMKP23919 212 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 RPL23AP62750 156 aaKnown RBP12.26□□□□□ -0.45
LDB3-209ENST00000623056 KCNMB1Q16558 191 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 LBHQ53QV2 105 aaPredicted RBP12.26□□□□□ -0.45
LDB3-209ENST00000623056 ZNF385CQ66K41 422 aaPredicted RBP12.26□□□□□ -0.45
LDB3-209ENST00000623056 P4HA3Q7Z4N8 544 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 RCC1LQ96I51 464 aaKnown RBP12.26□□□□□ -0.45
LDB3-209ENST00000623056 SNX22Q96L94 193 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 LURAP1Q96LR2 239 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 SYT3Q9BQG1 590 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 IER2Q9BTL4 223 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 ZNF160Q9HCG1 818 aa12.26□□□□□ -0.45
LDB3-209ENST00000623056 GLRX2Q9NS18 164 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms