RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ZNF222Q9UK12 451 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 CSMD1Q96PZ7 3565 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 MYO9AB2RTY4 2548 aa13.03□□□□□ -0.32
PCDHGC3-204ENST00000617222 A0A1B0GW55 424 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 DPPA5A6NC42 116 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 NKX6-3A6NJ46 265 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 SMAD7O15105 426 aaKnown RBP13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 TMPRSS2O15393 492 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 MPIG6BO95866 241 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 HAND1O96004 215 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 IGHV2-5P01817 119 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 DUX4L2P0CJ85 424 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 DUX4L3P0CJ86 424 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 DUX4L4P0CJ87 422 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 DUX4L5P0CJ88 424 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 DUX4L6P0CJ89 424 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 DUX4L7P0CJ90 424 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 RPS2P15880 293 aaKnown RBP13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 MGMTP16455 207 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 CFPP27918 469 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 IL2RGP31785 369 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 QRFPP83859 136 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 SCN1BQ07699 218 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 SPCS2Q15005 226 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 ZNF146Q15072 292 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 PIGYQ3MUY2 71 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 DUX4L9Q6RFH8 374 aaPredicted RBP13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 METAP1DQ6UB28 335 aaPredicted RBP13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 ZNF788Q6ZQV5 615 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 SLC36A1Q7Z2H8 476 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 FAM216BQ8N7L0 139 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 OR51T1Q8NGJ9 327 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 KCNG3Q8TAE7 436 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 NEIL1Q96FI4 390 aaPredicted RBP13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 GAFA1Q96PS6 74 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 CST11Q9H112 138 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 DNTTIP1Q9H147 329 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 LIN7BQ9HAP6 207 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 KAAG1Q9UBP8 84 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 CTSZQ9UBR2 303 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 DUX4Q9UBX2 424 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 GLS2Q9UI32 602 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 ST3GAL6Q9Y274 331 aa13.02□□□□□ -0.33
PCDHGC3-204ENST00000617222 TMEM272A0A1B0GTI8 110 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 TMEM14DPA8MWL7 114 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 F5H0A9 414 aaPredicted RBP13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 H3BMQ9 156 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 SH2D1BO14796 132 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 DEGS1O15121 323 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 HEXAP06865 529 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 CHRM2P08172 466 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 SELLP14151 372 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 RBM11P57052 281 aaKnown RBP13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 COL10A1Q03692 680 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 IKZF1Q13422 519 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 IL13RA2Q14627 380 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 TAF9Q16594 264 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 SPIN3Q5JUX0 258 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 NLRC3Q7RTR2 1065 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 OR8B3Q8NGG8 313 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 SLC25A46Q96AG3 418 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 RAB39BQ96DA2 213 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 MRPS24Q96EL2 167 aaKnown RBP13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 SDSLQ96GA7 329 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 MED30Q96HR3 178 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 OR8B2Q96RD0 313 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 SELENOIQ9C0D9 397 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 RBM38Q9H0Z9 239 aaKnown RBP13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 SEBOXQ9HB31 216 aaPredicted RBP13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 OR5V1Q9UGF6 321 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 MAB21L2Q9Y586 359 aa13.01□□□□□ -0.33
PCDHGC3-204ENST00000617222 SIRPB1O00241 398 aa13□□□□□ -0.33
PCDHGC3-204ENST00000617222 GEMIN2O14893 280 aaKnown RBP13□□□□□ -0.33
PCDHGC3-204ENST00000617222 SIGLEC5O15389 551 aa13□□□□□ -0.33
PCDHGC3-204ENST00000617222 NDUFB3O43676 98 aa13□□□□□ -0.33
PCDHGC3-204ENST00000617222 OR2H2O95918 312 aa13□□□□□ -0.33
PCDHGC3-204ENST00000617222 SNRPBP14678 240 aaKnown RBP13□□□□□ -0.33
PCDHGC3-204ENST00000617222 ZNF44P15621 663 aa13□□□□□ -0.33
PCDHGC3-204ENST00000617222 PITPNBP48739 271 aa13□□□□□ -0.33
PCDHGC3-204ENST00000617222 RORCP51449 518 aa13□□□□□ -0.33
PCDHGC3-204ENST00000617222 SEC61A1P61619 476 aaKnown RBP13□□□□□ -0.33
PCDHGC3-204ENST00000617222 IL13RA1P78552 427 aa13□□□□□ -0.33
PCDHGC3-204ENST00000617222 PLA2G7Q13093 441 aa13□□□□□ -0.33
PCDHGC3-204ENST00000617222 UNC119Q13432 240 aa13□□□□□ -0.33
PCDHGC3-204ENST00000617222 NHLRC3Q5JS37 347 aa13□□□□□ -0.33
PCDHGC3-204ENST00000617222 Q6P435 159 aa13□□□□□ -0.33
PCDHGC3-204ENST00000617222 SPNS3Q6ZMD2 512 aa13□□□□□ -0.33
PCDHGC3-204ENST00000617222 ZNF841Q6ZN19 808 aa13□□□□□ -0.33
PCDHGC3-204ENST00000617222 OR2W3Q7Z3T1 314 aa13□□□□□ -0.33
PCDHGC3-204ENST00000617222 CROCCP3Q8IVE0 287 aa13□□□□□ -0.33
PCDHGC3-204ENST00000617222 ZNRF1Q8ND25 227 aa13□□□□□ -0.33
PCDHGC3-204ENST00000617222 TMEM59Q9BXS4 323 aa13□□□□□ -0.33
PCDHGC3-204ENST00000617222 RSL24D1Q9UHA3 163 aaKnown RBP13□□□□□ -0.33
PCDHGC3-204ENST00000617222 CREBBPQ92793 2442 aa12.99□□□□□ -0.33
PCDHGC3-204ENST00000617222 MED13LQ71F56 2210 aa12.99□□□□□ -0.33
PCDHGC3-204ENST00000617222 SMIM31A0A1B0GVY4 71 aa12.99□□□□□ -0.33
PCDHGC3-204ENST00000617222 FAM157AC9JC47 383 aa12.99□□□□□ -0.33
PCDHGC3-204ENST00000617222 DVL1O14640 695 aa12.99□□□□□ -0.33
PCDHGC3-204ENST00000617222 LDLRAD4O15165 306 aa12.99□□□□□ -0.33
PCDHGC3-204ENST00000617222 PAHP00439 452 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms