RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 UFSP2Q9NUQ7 469 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 GHRLQ9UBU3 117 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 SPTAN1Q13813 2472 aaKnown RBP6.65□□□□□ -1.34
NEK3-207ENST00000617054 TMEM82A0PJX8 343 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 PRRG2O14669 202 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 GSTP1P09211 210 aaKnown RBP6.65□□□□□ -1.34
NEK3-207ENST00000617054 ZNF35P13682 527 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 PRKACAP17612 351 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 TMPRSS3P57727 454 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 MRPL49Q13405 166 aaKnown RBP6.65□□□□□ -1.34
NEK3-207ENST00000617054 SF3B4Q15427 424 aaKnown RBP eCLIP6.65□□□□□ -1.34
NEK3-207ENST00000617054 BEND4Q6ZU67 534 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 CDH24Q86UP0 819 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 FAM219AQ8IW50 185 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 EMG1Q92979 244 aaKnown RBP6.65□□□□□ -1.34
NEK3-207ENST00000617054 ZNF442Q9H7R0 627 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 OBP2BQ9NPH6 170 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 SCP2D1Q9UJQ7 156 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 ABCA4P78363 2273 aa6.65□□□□□ -1.35
NEK3-207ENST00000617054 TRAV39A0A0B4J263 110 aa6.65□□□□□ -1.35
NEK3-207ENST00000617054 FAM172BPA6NC97 362 aa6.65□□□□□ -1.35
NEK3-207ENST00000617054 F5H5P2 479 aa6.65□□□□□ -1.35
NEK3-207ENST00000617054 TPPPO94811 219 aa6.65□□□□□ -1.35
NEK3-207ENST00000617054 CST4P01036 141 aa6.65□□□□□ -1.35
NEK3-207ENST00000617054 OR4E1P0C645 316 aa6.65□□□□□ -1.35
NEK3-207ENST00000617054 CEBPDP49716 269 aaPredicted RBP6.65□□□□□ -1.35
NEK3-207ENST00000617054 LY6DQ14210 128 aa6.65□□□□□ -1.35
NEK3-207ENST00000617054 MPPED2Q15777 294 aa6.65□□□□□ -1.35
NEK3-207ENST00000617054 FTMTQ8N4E7 242 aa6.65□□□□□ -1.35
NEK3-207ENST00000617054 CCDC54Q8NEL0 328 aa6.65□□□□□ -1.35
NEK3-207ENST00000617054 CASTOR1Q8WTX7 329 aa6.65□□□□□ -1.35
NEK3-207ENST00000617054 RDH5Q92781 318 aa6.65□□□□□ -1.35
NEK3-207ENST00000617054 MARS2Q96GW9 593 aaKnown RBP6.65□□□□□ -1.35
NEK3-207ENST00000617054 CMSS1Q9BQ75 279 aaKnown RBP6.65□□□□□ -1.35
NEK3-207ENST00000617054 EHFQ9NZC4 300 aa6.65□□□□□ -1.35
NEK3-207ENST00000617054 MGAT4CQ9UBM8 478 aa6.65□□□□□ -1.35
NEK3-207ENST00000617054 CACNA1AO00555 2505 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 CHD3Q12873 2000 aaKnown RBP6.64□□□□□ -1.35
NEK3-207ENST00000617054 IGHV2OR16-5A0A0B4J2B6 119 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 CCSO14618 274 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 CREBL2O60519 120 aaPredicted RBP6.64□□□□□ -1.35
NEK3-207ENST00000617054 NOS1APO75052 506 aaPredicted RBP6.64□□□□□ -1.35
NEK3-207ENST00000617054 TSC22D2O75157 780 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 CHATP28329 748 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 OR3A3P47888 321 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 RBM11P57052 281 aaKnown RBP6.64□□□□□ -1.35
NEK3-207ENST00000617054 MAB21L1Q13394 359 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 METTL11BQ5VVY1 283 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 DCAF12L2Q5VW00 463 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 ASCL4Q6XD76 172 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 SLC7A5P1Q8MH63 180 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 ZSCAN4Q8NAM6 433 aaPredicted RBP6.64□□□□□ -1.35
NEK3-207ENST00000617054 OR5A2Q8NGI9 324 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 UBALD1Q8TB05 177 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 WDR13Q9H1Z4 485 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 LIME1Q9H400 295 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 RALYQ9UKM9 306 aaKnown RBP6.64□□□□□ -1.35
NEK3-207ENST00000617054 SLC25A15Q9Y619 301 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 CFAP46Q8IYW2 2715 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 A0A1B0GUH1 482 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 A8MXE2 369 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 DISC1C4P0D8 188 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 TRAPPC2LH3BP13 241 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 WNT9BO14905 357 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 MLNRO43193 412 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 GLRA1P23415 457 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 TIMP3P35625 211 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 H2BFSP57053 126 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 IFITM2Q01629 132 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 IKZF1Q13422 519 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 SPRNQ5BIV9 151 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 PRAMEF6Q5VXH4 476 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 NLRC3Q7RTR2 1065 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 SCCPDHQ8NBX0 429 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 OR5H2Q8NGV7 314 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 NEK7Q8TDX7 302 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 ADAT1Q9BUB4 502 aaKnown RBP6.64□□□□□ -1.35
NEK3-207ENST00000617054 TREM2Q9NZC2 230 aa6.64□□□□□ -1.35
NEK3-207ENST00000617054 CSMD1Q96PZ7 3565 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 GOSR2O14653 212 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 SCGNO76038 276 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 SULT1A3P0DMM9 295 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 SULT1A4P0DMN0 295 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 SSTR2P30874 369 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 ZNF154Q13106 437 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 PPP1R1AQ13522 171 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 P2RY6Q15077 328 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 CHRFAM7AQ494W8 412 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 CD276Q5ZPR3 534 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 ZNF626Q68DY1 528 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 FBXW12Q6X9E4 464 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 Q6ZR03 302 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 PXT1Q8NFP0 134 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 OR2T35Q8NGX2 323 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 OR13G1Q8NGZ3 307 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 SLX1AQ9BQ83 275 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 SYT3Q9BQG1 590 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 ZFYVE26Q68DK2 2539 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 OR5H14A6NHG9 310 aa6.63□□□□□ -1.35
NEK3-207ENST00000617054 SERPINE3A8MV23 424 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms