RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 J3QRE1 110 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 SFTA3P0C7M3 94 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 GABRA1P14867 456 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 ZNF239Q16600 458 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 CLLU1Q5K131 121 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 SLC25A42Q86VD7 318 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 BAP18Q8IXM2 172 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 MRGPRDQ8TDS7 321 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 PIGMQ9H3S5 423 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 TRGV8A0A0C4DH27 118 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 GPR31O00270 319 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 TAGLN2P37802 199 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 GNG3P63215 75 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 ZNF718Q3SXZ3 478 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 PRAMEF5Q5TYX0 476 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 PRAMEF6Q5VXH4 476 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 RPUSD3Q6P087 351 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 UNQ9370/PRO34162Q6UXP9 181 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 OR5M8Q8NGP6 311 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 OR13G1Q8NGZ3 307 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 FRZBQ92765 325 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 AKR1E2Q96JD6 320 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 CHST5Q9GZS9 411 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 RAB18Q9NP72 206 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 SPAG17Q6Q759 2223 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 PLXND1Q9Y4D7 1925 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 A0A0B4J293 547 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 LINC01387J3KSC0 135 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 PRRG2O14669 202 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 HMGB3O15347 200 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 BHLHA15Q7RTS1 189 aaPredicted RBP7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 ERGIC1Q969X5 290 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 MRPL24Q96A35 216 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 RSPO3Q9BXY4 272 aaPredicted RBP7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 UNKLQ9H9P5 680 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 STARD10Q9Y365 291 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 C3orf80F5H4A9 247 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 CTXN2P0C2S0 81 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 CPN1P15169 458 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 PDLIM3Q53GG5 364 aaPredicted RBP7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 OR8U1Q8NH10 309 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 GALMQ96C23 342 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 SSX3Q99909 188 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 OR2D2Q9H210 308 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 TAAR5O14804 337 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 TXNL1O43396 289 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 DUS4LO95620 317 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 GPR137Q96N19 417 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 SIGLEC12Q96PQ1 595 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 OPN3Q9H1Y3 402 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 RAB9BQ9NP90 201 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 HEYLQ9NQ87 328 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 LIN7CQ9NUP9 197 aaKnown RBP7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 KIAA1671Q9BY89 1806 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 UMAD1C9J7I0 102 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 PDCD6O75340 191 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 MMP16P51512 607 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 RAG2P55895 527 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 RAB11AP62491 216 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 TLE1Q04724 770 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 OR11H4Q8NGC9 324 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 LRRC29Q8WV35 223 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 GPHA2Q96T91 129 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 C19orf12Q9NSK7 152 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 ZNF629Q9UEG4 869 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 LRRC30A6NM36 301 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 TTLL8A6PVC2 850 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 C21orf140B9A014 251 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 JTBO76095 146 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 NGFP01138 241 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 CRYAAP02489 173 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 UMODP07911 640 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 ZP3P21754 424 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 CEBPDP49716 269 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 FNDC7Q5VTL7 733 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 TMEM251Q8N6I4 163 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 MS4A7Q9GZW8 240 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 ZNF724A8MTY0 619 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 CDIPTO14735 213 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 H2AFB1P0C5Y9 115 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 MST1P26927 711 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 ADIRFQ15847 76 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 ZNF260Q3ZCT1 412 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 IL17BQ9UHF5 180 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 OPN4Q9UHM6 478 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 ANXA10Q9UJ72 324 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 TINAGQ9UJW2 476 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 CCDC88CQ9P219 2028 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 B4E171 279 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 FSTP19883 344 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 TSPAN7P41732 249 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 DHODHQ02127 395 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 ROM1Q03395 351 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 RAB31Q13636 194 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 GAPTQ8N292 157 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 GHITMQ9H3K2 345 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 FN3KRPQ9HA64 309 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 RHOFQ9HBH0 211 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 RASL12Q9NYN1 266 aa7.79□□□□□ -1.16
PDLIM5-222ENST00000615540 MTCH1Q9NZJ7 389 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms