RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 FAM90A20PA6NIJ5 464 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 FAM90A8PA6NJQ4 464 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 FAM90A7PA6NKC0 464 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 FOXI3A8MTJ6 420 aaPredicted RBP9.64□□□□□ -0.87
SLIRP-212ENST00000613856 FAM90A22PA8MWA6 464 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 FAM90A12PA8MX19 464 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 FAM90A5PA8MXJ8 464 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 FAM90A23PA8MXZ1 464 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 RAB27BO00194 218 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 CDIPTO14735 213 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 CRLF1O75462 422 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 RHBDL1O75783 438 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 HTR3BO95264 441 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 GRPP07492 148 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 FAM90A15PP0C7V4 464 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 FAM90A13PP0C7W8 464 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 FAM90A14PP0C7W9 464 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 FAM90A24PP0C7X0 464 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 DANCRP0C864 163 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 BCL3P20749 454 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 PITPNBP48739 271 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 PPP5CP53041 499 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 RBM11P57052 281 aaKnown RBP9.64□□□□□ -0.87
SLIRP-212ENST00000613856 IL18Q14116 193 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 IL13RA2Q14627 380 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 TMEM69Q5SWH9 247 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 AGAP6Q5VW22 663 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 C11orf71Q6IPW1 123 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 WDR82Q6UXN9 313 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 LINC00596Q86U02 117 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 GDPD1Q8N9F7 314 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 MAPK1IP1LQ8NDC0 245 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 OR56B1Q8NGI3 324 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 ITLN1Q8WWA0 313 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 BORCS5Q969J3 196 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 PHF21AQ96BD5 680 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 CCDC32Q9BV29 185 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 BANF2Q9H503 90 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 FN3KRPQ9HA64 309 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 HES4Q9HCC6 221 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 PALMDQ9NP74 551 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 CBLN4Q9NTU7 201 aa9.64□□□□□ -0.87
SLIRP-212ENST00000613856 A0A0A6YYD4 124 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 A0A0G2JMP0 313 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 A0A0X1KG70 313 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 A6NLC8 198 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 CTDSPLO15194 276 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 TNFRSF1AP19438 455 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 NPBWR2P48146 333 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 PTH2RP49190 550 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 TAS2R20P59543 309 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 MRPS10P82664 201 aaKnown RBP9.63□□□□□ -0.87
SLIRP-212ENST00000613856 PITPNAQ00169 270 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 MPPED2Q15777 294 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 ZNF181Q2M3W8 571 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 MPV17LQ2QL34 196 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 OR4M2Q8NGB6 313 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 OR10R2Q8NGX6 335 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 ZFAND2BQ8WV99 257 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 GAL3ST1Q99999 423 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 NICN1Q9BSH3 213 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 SELENOIQ9C0D9 397 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 EGLN1Q9GZT9 426 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.63□□□□□ -0.87
SLIRP-212ENST00000613856 RBFOX1Q9NWB1 397 aaKnown RBP9.63□□□□□ -0.87
SLIRP-212ENST00000613856 C1orf123Q9NWV4 160 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 USF3Q68DE3 2245 aa9.63□□□□□ -0.87
SLIRP-212ENST00000613856 SRRM5B3KS81 715 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 F8VVB4 439 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 F8VWA3 439 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 H3BUI4 141 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 IFNL4K9M1U5 179 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 TPD52L2O43399 206 aaKnown RBP9.62□□□□□ -0.87
SLIRP-212ENST00000613856 CD8AP01732 235 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 HLA-DQB1P01920 261 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 VEGFCP49767 419 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 ARL6IP1Q15041 203 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 MOGAT2Q3SYC2 334 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 SPRNQ5BIV9 151 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 SPIN3Q5JUX0 258 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 ZNF826PQ6ZT77 177 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 MOGAT3Q86VF5 341 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 FAM90A1Q86YD7 464 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 FAM58AQ8N1B3 248 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 HPS1Q92902 700 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 EMG1Q92979 244 aaKnown RBP9.62□□□□□ -0.87
SLIRP-212ENST00000613856 ZNF488Q96MN9 340 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 ABHD1Q96SE0 405 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 SDHCQ99643 169 aaPredicted RBP9.62□□□□□ -0.87
SLIRP-212ENST00000613856 TRAF4Q9BUZ4 470 aaPredicted RBP9.62□□□□□ -0.87
SLIRP-212ENST00000613856 CXorf56Q9H5V9 222 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 IFT22Q9H7X7 185 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 SAP30LQ9HAJ7 183 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 GCM1Q9NP62 436 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 UFSP2Q9NUQ7 469 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 RASL12Q9NYN1 266 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 ST3GAL6Q9Y274 331 aa9.62□□□□□ -0.87
SLIRP-212ENST00000613856 TRAV18A0A075B6X5 111 aa9.61□□□□□ -0.87
SLIRP-212ENST00000613856 IGHV3-64DA0A0J9YX35 117 aa9.61□□□□□ -0.87
SLIRP-212ENST00000613856 hCG_1807616A0A1W2PRN6 198 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms