RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 CDRT1O95170 752 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 HTR3BO95264 441 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 HAND1O96004 215 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 LIPFP07098 398 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 UBBP0CG47 229 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 CD36P16671 472 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 NDUFB7P17568 137 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 AMY2BP19961 511 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 SNU13P55769 128 aaKnown RBP11.02□□□□□ -0.65
MDC1-209ENST00000613547 CAV3P56539 151 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 FGF12P61328 243 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 ZNF146Q15072 292 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 DGUOKQ16854 277 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 ELP2Q6IA86 826 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 LRRTM1Q86UE6 522 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 LURAP1LQ8IV03 231 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 ASCC1Q8N9N2 400 aaKnown RBP11.02□□□□□ -0.65
MDC1-209ENST00000613547 ZNRF1Q8ND25 227 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 PPP1R35Q8TAP8 253 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 H1FXQ92522 213 aaKnown RBP11.02□□□□□ -0.65
MDC1-209ENST00000613547 NKX3-1Q99801 234 aaPredicted RBP11.02□□□□□ -0.65
MDC1-209ENST00000613547 FAM234AQ9H0X4 552 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 CNTD2Q9H8S5 307 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 GHRLQ9UBU3 117 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 MAB21L2Q9Y586 359 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 ZANQ9Y493 2812 aa11.02□□□□□ -0.65
MDC1-209ENST00000613547 CR1P17927 2039 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 VPS13CQ709C8 3753 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 TRAV1-2A0A0B4J238 106 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 A0A1B0GW55 424 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 TRIM64CA6NLI5 447 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 TFF1P04155 84 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 DUX4L2P0CJ85 424 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 DUX4L3P0CJ86 424 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 DUX4L4P0CJ87 422 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 DUX4L5P0CJ88 424 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 DUX4L6P0CJ89 424 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 DUX4L7P0CJ90 424 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 CALCBP10092 127 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 GTF2F2P13984 249 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 JUNBP17275 347 aaPredicted RBP11.01□□□□□ -0.65
MDC1-209ENST00000613547 ADRA2CP18825 462 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 FGF9P31371 208 aaPredicted RBP11.01□□□□□ -0.65
MDC1-209ENST00000613547 CEBPDP49716 269 aaPredicted RBP11.01□□□□□ -0.65
MDC1-209ENST00000613547 COL10A1Q03692 680 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 CR1LQ2VPA4 569 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 SLC22A6Q4U2R8 563 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 C22orf42Q6IC83 251 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 DUX4L9Q6RFH8 374 aaPredicted RBP11.01□□□□□ -0.65
MDC1-209ENST00000613547 GLIPR1L1Q6UWM5 242 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 BTN2A1Q7KYR7 527 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 C1QL2Q7Z5L3 287 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 OSR2Q8N2R0 312 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 CHST4Q8NCG5 386 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 OR5D13Q8NGL4 314 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 OR6M1Q8NGM8 313 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 OR10K1Q8NGX5 313 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 TBC1D15Q8TC07 691 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 MRPS24Q96EL2 167 aaKnown RBP11.01□□□□□ -0.65
MDC1-209ENST00000613547 NUDT16L1Q9BRJ7 211 aaKnown RBP11.01□□□□□ -0.65
MDC1-209ENST00000613547 MRI1Q9BV20 369 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 MRPS26Q9BYN8 205 aaKnown RBP11.01□□□□□ -0.65
MDC1-209ENST00000613547 SHARPINQ9H0F6 387 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 CST11Q9H112 138 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 PPIL3Q9H2H8 161 aaKnown RBP11.01□□□□□ -0.65
MDC1-209ENST00000613547 C7orf69Q9H7B7 122 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 PLGRKTQ9HBL7 147 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 IL36RNQ9UBH0 155 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 DUX4Q9UBX2 424 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 LPAR3Q9UBY5 353 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 CDC42EP3Q9UKI2 254 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 ABCA1O95477 2261 aa11.01□□□□□ -0.65
MDC1-209ENST00000613547 TRBV23-1A0A0A0MS06 115 aa11□□□□□ -0.65
MDC1-209ENST00000613547 IGHV2-70DA0A0C4DH43 119 aa11□□□□□ -0.65
MDC1-209ENST00000613547 KIR2DS1A0A191URI9 304 aa11□□□□□ -0.65
MDC1-209ENST00000613547 TK1P04183 234 aa11□□□□□ -0.65
MDC1-209ENST00000613547 ZNF44P15621 663 aa11□□□□□ -0.65
MDC1-209ENST00000613547 SERPINA2P20848 420 aa11□□□□□ -0.65
MDC1-209ENST00000613547 GABRR1P24046 479 aa11□□□□□ -0.65
MDC1-209ENST00000613547 HTR2CP28335 458 aa11□□□□□ -0.65
MDC1-209ENST00000613547 DUSP1P28562 367 aa11□□□□□ -0.65
MDC1-209ENST00000613547 SCN1BQ07699 218 aa11□□□□□ -0.65
MDC1-209ENST00000613547 IL13RA2Q14627 380 aa11□□□□□ -0.65
MDC1-209ENST00000613547 C1orf100Q5SVJ3 147 aa11□□□□□ -0.65
MDC1-209ENST00000613547 Q8NFD4 153 aa11□□□□□ -0.65
MDC1-209ENST00000613547 OR4D6Q8NGJ1 314 aa11□□□□□ -0.65
MDC1-209ENST00000613547 OR51T1Q8NGJ9 327 aa11□□□□□ -0.65
MDC1-209ENST00000613547 SNX22Q96L94 193 aa11□□□□□ -0.65
MDC1-209ENST00000613547 DMRTB1Q96MA1 342 aa11□□□□□ -0.65
MDC1-209ENST00000613547 KCTD7Q96MP8 289 aa11□□□□□ -0.65
MDC1-209ENST00000613547 CHCHD6Q9BRQ6 235 aa11□□□□□ -0.65
MDC1-209ENST00000613547 MMP26Q9NRE1 261 aa11□□□□□ -0.65
MDC1-209ENST00000613547 TXNL4BQ9NX01 149 aaKnown RBP11□□□□□ -0.65
MDC1-209ENST00000613547 RPUSD1Q9UJJ7 312 aaKnown RBP11□□□□□ -0.65
MDC1-209ENST00000613547 ST3GAL6Q9Y274 331 aa11□□□□□ -0.65
MDC1-209ENST00000613547 AK6Q9Y3D8 172 aaKnown RBP11□□□□□ -0.65
MDC1-209ENST00000613547 INSIG2Q9Y5U4 225 aa11□□□□□ -0.65
MDC1-209ENST00000613547 V9GY05 133 aa11□□□□□ -0.65
MDC1-209ENST00000613547 MED13LQ71F56 2210 aa11□□□□□ -0.65
MDC1-209ENST00000613547 NSD1Q96L73 2696 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms