RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 INSIG2Q9Y5U4 225 aa11.52□□□□□ -0.57
RNF40-212ENST00000602784 FN1P02751 2386 aaKnown RBP11.52□□□□□ -0.57
RNF40-212ENST00000602784 IGHV2-70DA0A0C4DH43 119 aa11.51□□□□□ -0.57
RNF40-212ENST00000602784 ENSAO43768 121 aaKnown RBP11.51□□□□□ -0.57
RNF40-212ENST00000602784 ZNF780AO75290 641 aaPredicted RBP11.51□□□□□ -0.57
RNF40-212ENST00000602784 JUNBP17275 347 aaPredicted RBP11.51□□□□□ -0.57
RNF40-212ENST00000602784 PRKACAP17612 351 aa11.51□□□□□ -0.57
RNF40-212ENST00000602784 FGF9P31371 208 aaPredicted RBP11.51□□□□□ -0.57
RNF40-212ENST00000602784 OR3A4PP47883 348 aa11.51□□□□□ -0.57
RNF40-212ENST00000602784 FGF12P61328 243 aa11.51□□□□□ -0.57
RNF40-212ENST00000602784 IKZF1Q13422 519 aa11.51□□□□□ -0.57
RNF40-212ENST00000602784 GPR176Q14439 515 aa11.51□□□□□ -0.57
RNF40-212ENST00000602784 NEDD8Q15843 81 aa11.51□□□□□ -0.57
RNF40-212ENST00000602784 C1orf100Q5SVJ3 147 aa11.51□□□□□ -0.57
RNF40-212ENST00000602784 GLT8D1Q68CQ7 371 aa11.51□□□□□ -0.57
RNF40-212ENST00000602784 BATF2Q8N1L9 274 aa11.51□□□□□ -0.57
RNF40-212ENST00000602784 JAGN1Q8N5M9 183 aa11.51□□□□□ -0.57
RNF40-212ENST00000602784 TEX29Q8N6K0 151 aa11.51□□□□□ -0.57
RNF40-212ENST00000602784 OR51T1Q8NGJ9 327 aa11.51□□□□□ -0.57
RNF40-212ENST00000602784 S100A13Q99584 98 aa11.51□□□□□ -0.57
RNF40-212ENST00000602784 METTL9Q9H1A3 318 aa11.51□□□□□ -0.57
RNF40-212ENST00000602784 CNTD2Q9H8S5 307 aa11.51□□□□□ -0.57
RNF40-212ENST00000602784 SLC25A10Q9UBX3 287 aaPredicted RBP11.51□□□□□ -0.57
RNF40-212ENST00000602784 LPAR3Q9UBY5 353 aa11.51□□□□□ -0.57
RNF40-212ENST00000602784 ARHGAP32A7KAX9 2087 aa11.51□□□□□ -0.57
RNF40-212ENST00000602784 TRAV1-2A0A0B4J238 106 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 A0A1B0GW55 424 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 C22orf46C9J442 243 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 K7N7A8 449 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 SH2D1BO14796 132 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 CDRT1O95170 752 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 HAND1O96004 215 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 TFF1P04155 84 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 DUX4L2P0CJ85 424 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 DUX4L3P0CJ86 424 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 DUX4L4P0CJ87 422 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 DUX4L5P0CJ88 424 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 DUX4L6P0CJ89 424 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 DUX4L7P0CJ90 424 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 PPIAL4GP0DN37 164 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 CALRP27797 417 aaKnown RBP11.5□□□□□ -0.57
RNF40-212ENST00000602784 PSMD7P51665 324 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 PAX8Q06710 450 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 CR1LQ2VPA4 569 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 NHLRC3Q5JS37 347 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 FAM120AOSQ5T036 256 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 FAHD2BQ6P2I3 314 aaPredicted RBP11.5□□□□□ -0.57
RNF40-212ENST00000602784 DUX4L9Q6RFH8 374 aaPredicted RBP11.5□□□□□ -0.57
RNF40-212ENST00000602784 BTNL3Q6UXE8 466 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 BTN2A1Q7KYR7 527 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 ZNRF1Q8ND25 227 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 C8orf46Q8TAG6 207 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 TBC1D15Q8TC07 691 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 ST8SIA4Q92187 359 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 MRPS24Q96EL2 167 aaKnown RBP11.5□□□□□ -0.57
RNF40-212ENST00000602784 FAHD2AQ96GK7 314 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 NUDT16L1Q9BRJ7 211 aaKnown RBP11.5□□□□□ -0.57
RNF40-212ENST00000602784 FAM192AQ9GZU8 254 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 GHRLQ9UBU3 117 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 DUX4Q9UBX2 424 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 OR14J1Q9UGF5 321 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 RPUSD1Q9UJJ7 312 aaKnown RBP11.5□□□□□ -0.57
RNF40-212ENST00000602784 CDC42EP3Q9UKI2 254 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 STUB1Q9UNE7 303 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 ING4Q9UNL4 249 aa11.5□□□□□ -0.57
RNF40-212ENST00000602784 TRBV23-1A0A0A0MS06 115 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 INAFM1C9JVW0 142 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 ZNF737O75373 536 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 CSTBP04080 98 aaKnown RBP11.49□□□□□ -0.57
RNF40-212ENST00000602784 TK1P04183 234 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 UBBP0CG47 229 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 SELLP14151 372 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 HNF1AP20823 631 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 LMO1P25800 156 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 RANBP1P43487 201 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 COL10A1Q03692 680 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 CHST4Q8NCG5 386 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 LY6G5BQ8NDX9 201 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 TMEM185AQ8NFB2 350 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 OR4D6Q8NGJ1 314 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 OR5D13Q8NGL4 314 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 SNX22Q96L94 193 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 DCTN5Q9BTE1 182 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 TMPRSS13Q9BYE2 586 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 C7orf69Q9H7B7 122 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 ELL3Q9HB65 397 aaPredicted RBP11.49□□□□□ -0.57
RNF40-212ENST00000602784 IL36RNQ9UBH0 155 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 METRNQ9UJH8 293 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 SSR3Q9UNL2 185 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 GSTK1Q9Y2Q3 226 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 MRPS28Q9Y2Q9 187 aaKnown RBP11.49□□□□□ -0.57
RNF40-212ENST00000602784 NF1P21359 2839 aa11.49□□□□□ -0.57
RNF40-212ENST00000602784 CRLF1O75462 422 aa11.48□□□□□ -0.57
RNF40-212ENST00000602784 HTR3BO95264 441 aa11.48□□□□□ -0.57
RNF40-212ENST00000602784 GTF2F2P13984 249 aa11.48□□□□□ -0.57
RNF40-212ENST00000602784 CD36P16671 472 aa11.48□□□□□ -0.57
RNF40-212ENST00000602784 NDUFB7P17568 137 aa11.48□□□□□ -0.57
RNF40-212ENST00000602784 CEBPDP49716 269 aaPredicted RBP11.48□□□□□ -0.57
RNF40-212ENST00000602784 CAPZA1P52907 286 aa11.48□□□□□ -0.57
RNF40-212ENST00000602784 IL13RA2Q14627 380 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms