RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 PPP1R1AQ13522 171 aa10.07□□□□□ -0.8
VRK3-223ENST00000601341 TBC1D28Q2M2D7 210 aa10.07□□□□□ -0.8
VRK3-223ENST00000601341 TIMM23BQ5SRD1 257 aa10.07□□□□□ -0.8
VRK3-223ENST00000601341 COLCA1Q6ZS62 124 aa10.07□□□□□ -0.8
VRK3-223ENST00000601341 PEG10Q86TG7 708 aaKnown RBP10.07□□□□□ -0.8
VRK3-223ENST00000601341 RELL2Q8NC24 303 aaPredicted RBP10.07□□□□□ -0.8
VRK3-223ENST00000601341 NUDCD2Q8WVJ2 157 aa10.07□□□□□ -0.8
VRK3-223ENST00000601341 NKX3-1Q99801 234 aaPredicted RBP10.07□□□□□ -0.8
VRK3-223ENST00000601341 CHST5Q9GZS9 411 aa10.07□□□□□ -0.8
VRK3-223ENST00000601341 NARFLQ9H6Q4 476 aa10.07□□□□□ -0.8
VRK3-223ENST00000601341 KANTRA0A1W2PQU2 76 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 ZSCAN5BA6NJL1 495 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 OR2AT4A6NND4 320 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 FOXI3A8MTJ6 420 aaPredicted RBP10.06□□□□□ -0.8
VRK3-223ENST00000601341 IGKV3-15P01624 115 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 CCL2P13500 99 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 ANOS1P23352 680 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 FPR2P25090 351 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 PTGFRP43088 359 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 IDH3GP51553 393 aaPredicted RBP10.06□□□□□ -0.8
VRK3-223ENST00000601341 KISS1Q15726 138 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 NKPD1Q17RQ9 610 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 SNAI3Q3KNW1 292 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 PLAC9Q5JTB6 97 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 ALKAL2Q6UX46 152 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 GVQW1Q8N7I0 195 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 FAM169BQ8N8A8 192 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 ST8SIA2Q92186 375 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 APOBEC3DQ96AK3 386 aaPredicted RBP10.06□□□□□ -0.8
VRK3-223ENST00000601341 SGK3Q96BR1 496 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 S100PBPQ96BU1 408 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 CMBLQ96DG6 245 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 MUCL1Q96DR8 90 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 FAM71F1Q96KD3 344 aaPredicted RBP10.06□□□□□ -0.8
VRK3-223ENST00000601341 GAL3ST1Q99999 423 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 PDCD10Q9BUL8 212 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 PPA2Q9H2U2 334 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 RAB18Q9NP72 206 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 COQ3Q9NZJ6 369 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 MYEF2Q9P2K5 600 aaKnown RBP10.06□□□□□ -0.8
VRK3-223ENST00000601341 GPR132Q9UNW8 380 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 A0A0A6YYD4 124 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 IGKV1-9A0A0C4DH69 117 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 C5orf63A6NC05 138 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 C16orf97H3BN30 126 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 XRCC2O43543 280 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 AGFG2O95081 481 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 MPIG6BO95866 241 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 ZNF250P15622 560 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 CPT2P23786 658 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 TMEM50BP56557 158 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 FAM27E3Q08E93 113 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 OR52W1Q6IF63 320 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 LHFPL1Q86WI0 220 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 GALNT11Q8NCW6 608 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 TMEM104Q8NE00 496 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 OR1S1Q8NH92 325 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 THAP6Q8TBB0 222 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 PPP1R1CQ8WVI7 109 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 SPSB1Q96BD6 273 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 POM121Q96HA1 1249 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 REEP6Q96HR9 211 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 GPER1Q99527 375 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 RASL12Q9NYN1 266 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 SLC25A15Q9Y619 301 aa10.06□□□□□ -0.8
VRK3-223ENST00000601341 RTTNQ86VV8 2226 aa10.05□□□□□ -0.8
VRK3-223ENST00000601341 J3QW42 95 aa10.05□□□□□ -0.8
VRK3-223ENST00000601341 CHRNB4P30926 498 aa10.05□□□□□ -0.8
VRK3-223ENST00000601341 NUP62P37198 522 aaPredicted RBP10.05□□□□□ -0.8
VRK3-223ENST00000601341 OR3A4PP47883 348 aa10.05□□□□□ -0.8
VRK3-223ENST00000601341 NAAAQ02083 359 aa10.05□□□□□ -0.8
VRK3-223ENST00000601341 MALLQ13021 153 aa10.05□□□□□ -0.8
VRK3-223ENST00000601341 MICBQ29980 383 aa10.05□□□□□ -0.8
VRK3-223ENST00000601341 MOB3CQ70IA8 216 aa10.05□□□□□ -0.8
VRK3-223ENST00000601341 INO80EQ8NBZ0 244 aaPredicted RBP10.05□□□□□ -0.8
VRK3-223ENST00000601341 BVESQ8NE79 360 aa10.05□□□□□ -0.8
VRK3-223ENST00000601341 OR2AE1Q8NHA4 323 aa10.05□□□□□ -0.8
VRK3-223ENST00000601341 STOML3Q8TAV4 291 aa10.05□□□□□ -0.8
VRK3-223ENST00000601341 ST8SIA4Q92187 359 aa10.05□□□□□ -0.8
VRK3-223ENST00000601341 LYZL4Q96KX0 146 aa10.05□□□□□ -0.8
VRK3-223ENST00000601341 NICN1Q9BSH3 213 aa10.05□□□□□ -0.8
VRK3-223ENST00000601341 C1QTNF6Q9BXI9 259 aa10.05□□□□□ -0.8
VRK3-223ENST00000601341 CDH20Q9HBT6 801 aa10.05□□□□□ -0.8
VRK3-223ENST00000601341 COL6A6A6NMZ7 2263 aa10.05□□□□□ -0.8
VRK3-223ENST00000601341 KALRNO60229 2985 aa10.05□□□□□ -0.8
VRK3-223ENST00000601341 RNF222A6NCQ9 220 aa10.04□□□□□ -0.8
VRK3-223ENST00000601341 SOCS1O15524 211 aa10.04□□□□□ -0.8
VRK3-223ENST00000601341 CRTAPO75718 401 aaPredicted RBP10.04□□□□□ -0.8
VRK3-223ENST00000601341 IGLV1-44P01699 117 aa10.04□□□□□ -0.8
VRK3-223ENST00000601341 CELA3BP08861 270 aa10.04□□□□□ -0.8
VRK3-223ENST00000601341 LYL1P12980 280 aa10.04□□□□□ -0.8
VRK3-223ENST00000601341 PSMB6P28072 239 aa10.04□□□□□ -0.8
VRK3-223ENST00000601341 SSX8Q7RTT4 187 aa10.04□□□□□ -0.8
VRK3-223ENST00000601341 OR5L1Q8NGL2 311 aa10.04□□□□□ -0.8
VRK3-223ENST00000601341 OR5H2Q8NGV7 314 aa10.04□□□□□ -0.8
VRK3-223ENST00000601341 COQ8AQ8NI60 647 aa10.04□□□□□ -0.8
VRK3-223ENST00000601341 SPSB4Q96A44 273 aa10.04□□□□□ -0.8
VRK3-223ENST00000601341 SOX7Q9BT81 388 aa10.04□□□□□ -0.8
VRK3-223ENST00000601341 SHARPINQ9H0F6 387 aa10.04□□□□□ -0.8
VRK3-223ENST00000601341 EDARQ9UNE0 448 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms