RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 METTL9Q9H1A3 318 aa15.7■□□□□ 0.1
CCDC9-205ENST00000600117 ZNF665Q9H7R5 613 aa15.7■□□□□ 0.1
CCDC9-205ENST00000600117 CTSZQ9UBR2 303 aa15.7■□□□□ 0.1
CCDC9-205ENST00000600117 CDC42EP3Q9UKI2 254 aa15.7■□□□□ 0.1
CCDC9-205ENST00000600117 ING4Q9UNL4 249 aa15.7■□□□□ 0.1
CCDC9-205ENST00000600117 NDUFA2O43678 99 aa15.69■□□□□ 0.1
CCDC9-205ENST00000600117 KNG1P01042 644 aa15.69■□□□□ 0.1
CCDC9-205ENST00000600117 WNT2P09544 360 aa15.69■□□□□ 0.1
CCDC9-205ENST00000600117 CFPP27918 469 aa15.69■□□□□ 0.1
CCDC9-205ENST00000600117 HTR2CP28335 458 aa15.69■□□□□ 0.1
CCDC9-205ENST00000600117 PSMD7P51665 324 aa15.69■□□□□ 0.1
CCDC9-205ENST00000600117 NCS1P62166 190 aa15.69■□□□□ 0.1
CCDC9-205ENST00000600117 CTF1Q16619 201 aa15.69■□□□□ 0.1
CCDC9-205ENST00000600117 AWAT2Q6E213 333 aa15.69■□□□□ 0.1
CCDC9-205ENST00000600117 TPRA1Q86W33 373 aa15.69■□□□□ 0.1
CCDC9-205ENST00000600117 CD177Q8N6Q3 437 aa15.69■□□□□ 0.1
CCDC9-205ENST00000600117 CCL13Q99616 98 aa15.69■□□□□ 0.1
CCDC9-205ENST00000600117 DNTTIP1Q9H147 329 aa15.69■□□□□ 0.1
CCDC9-205ENST00000600117 KAAG1Q9UBP8 84 aa15.69■□□□□ 0.1
CCDC9-205ENST00000600117 MIOXQ9UGB7 285 aa15.69■□□□□ 0.1
CCDC9-205ENST00000600117 TENM1Q9UKZ4 2725 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 A0A1B0GW55 424 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 A0A1W2PP11 408 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 SMIM30A4D0T7 59 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 RFPL4AA6NLU0 287 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 RFPL4AL1F8VTS6 287 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 ADAM20O43506 726 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 FCN3O75636 299 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 DUX4L2P0CJ85 424 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 DUX4L3P0CJ86 424 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 DUX4L4P0CJ87 422 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 DUX4L5P0CJ88 424 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 DUX4L6P0CJ89 424 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 DUX4L7P0CJ90 424 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 PRKACAP17612 351 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 CEBPDP49716 269 aaPredicted RBP15.68■□□□□ 0.1
CCDC9-205ENST00000600117 FGF12P61328 243 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 RSU1Q15404 277 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 DGUOKQ16854 277 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 DUX4L9Q6RFH8 374 aaPredicted RBP15.68■□□□□ 0.1
CCDC9-205ENST00000600117 ZNF788Q6ZQV5 615 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 C1orf159Q96HA4 380 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 GAFA1Q96PS6 74 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 C19orf24Q9BVV8 132 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 SEBOXQ9HB31 216 aaPredicted RBP15.68■□□□□ 0.1
CCDC9-205ENST00000600117 ELL3Q9HB65 397 aaPredicted RBP15.68■□□□□ 0.1
CCDC9-205ENST00000600117 DUX4Q9UBX2 424 aa15.68■□□□□ 0.1
CCDC9-205ENST00000600117 IFITM5A6NNB3 132 aa15.67■□□□□ 0.1
CCDC9-205ENST00000600117 FAM157AC9JC47 383 aa15.67■□□□□ 0.1
CCDC9-205ENST00000600117 HTR3BO95264 441 aa15.67■□□□□ 0.1
CCDC9-205ENST00000600117 RPS2P15880 293 aaKnown RBP15.67■□□□□ 0.1
CCDC9-205ENST00000600117 CPT2P23786 658 aa15.67■□□□□ 0.1
CCDC9-205ENST00000600117 PRDX2P32119 198 aa15.67■□□□□ 0.1
CCDC9-205ENST00000600117 CAV3P56539 151 aa15.67■□□□□ 0.1
CCDC9-205ENST00000600117 SEC61A1P61619 476 aaKnown RBP15.67■□□□□ 0.1
CCDC9-205ENST00000600117 VBP1P61758 197 aa15.67■□□□□ 0.1
CCDC9-205ENST00000600117 ZNF146Q15072 292 aa15.67■□□□□ 0.1
CCDC9-205ENST00000600117 RAB11BQ15907 218 aa15.67■□□□□ 0.1
CCDC9-205ENST00000600117 SLC22A6Q4U2R8 563 aa15.67■□□□□ 0.1
CCDC9-205ENST00000600117 ZNF841Q6ZN19 808 aa15.67■□□□□ 0.1
CCDC9-205ENST00000600117 FAM216BQ8N7L0 139 aa15.67■□□□□ 0.1
CCDC9-205ENST00000600117 OR51T1Q8NGJ9 327 aa15.67■□□□□ 0.1
CCDC9-205ENST00000600117 RAB39BQ96DA2 213 aa15.67■□□□□ 0.1
CCDC9-205ENST00000600117 NEIL1Q96FI4 390 aaPredicted RBP15.67■□□□□ 0.1
CCDC9-205ENST00000600117 SDSLQ96GA7 329 aa15.67■□□□□ 0.1
CCDC9-205ENST00000600117 S100A13Q99584 98 aa15.67■□□□□ 0.1
CCDC9-205ENST00000600117 PLGRKTQ9HBL7 147 aa15.67■□□□□ 0.1
CCDC9-205ENST00000600117 GHRLQ9UBU3 117 aa15.67■□□□□ 0.1
CCDC9-205ENST00000600117 METRNQ9UJH8 293 aa15.67■□□□□ 0.1
CCDC9-205ENST00000600117 PCDHB10Q9UN67 800 aa15.67■□□□□ 0.1
CCDC9-205ENST00000600117 NOTOA8MTQ0 251 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 SIGLEC5O15389 551 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 WIPF1O43516 503 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 ZNF780AO75290 641 aaPredicted RBP15.66■□□□□ 0.1
CCDC9-205ENST00000600117 UBBP0CG47 229 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 SELLP14151 372 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 SERPINA2P20848 420 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 DUSP1P28562 367 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 GABRA2P47869 451 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 BMXP51813 675 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 SNU13P55769 128 aaKnown RBP15.66■□□□□ 0.1
CCDC9-205ENST00000600117 QRFPP83859 136 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 MXD1Q05195 221 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 GPR176Q14439 515 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 P2RY14Q15391 338 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 TMEM249Q2WGJ8 235 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 NHLRC3Q5JS37 347 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 SPIN3Q5JUX0 258 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 HES5Q5TA89 166 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 CLVS1Q8IUQ0 354 aaPredicted RBP15.66■□□□□ 0.1
CCDC9-205ENST00000600117 TMEM104Q8NE00 496 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 KCNK15Q9H427 330 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 OR14J1Q9UGF5 321 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 STEAP1Q9UHE8 339 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 MAB21L2Q9Y586 359 aa15.66■□□□□ 0.1
CCDC9-205ENST00000600117 MALRD1Q5VYJ5 2156 aa15.65■□□□□ 0.1
CCDC9-205ENST00000600117 NKX6-3A6NJ46 265 aa15.65■□□□□ 0.1
CCDC9-205ENST00000600117 AIPO00170 330 aa15.65■□□□□ 0.1
CCDC9-205ENST00000600117 TMPRSS2O15393 492 aa15.65■□□□□ 0.1
CCDC9-205ENST00000600117 BPNT1O95861 308 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms