RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 MED30Q96HR3 178 aa15.1■□□□□ 0.01
LIG1-216ENST00000598938 UQCC2Q9BRT2 126 aa15.1■□□□□ 0.01
LIG1-216ENST00000598938 FAM192AQ9GZU8 254 aa15.1■□□□□ 0.01
LIG1-216ENST00000598938 CNTD2Q9H8S5 307 aa15.1■□□□□ 0.01
LIG1-216ENST00000598938 SEBOXQ9HB31 216 aaPredicted RBP15.1■□□□□ 0.01
LIG1-216ENST00000598938 IL36GQ9NZH8 169 aa15.1■□□□□ 0.01
LIG1-216ENST00000598938 IL36RNQ9UBH0 155 aa15.1■□□□□ 0.01
LIG1-216ENST00000598938 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.1■□□□□ 0.01
LIG1-216ENST00000598938 TRAV1-2A0A0B4J238 106 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 TRAV20A0A0B4J274 112 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 DVL1O14640 695 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 SELLP14151 372 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 CD36P16671 472 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 PRKACAP17612 351 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 MTNR1BP49286 362 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 CEBPDP49716 269 aaPredicted RBP15.09■□□□□ 0.01
LIG1-216ENST00000598938 IL13RA1P78552 427 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 ZNF146Q15072 292 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 DGUOKQ16854 277 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 ELP2Q6IA86 826 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 C22orf42Q6IC83 251 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 FIP1L1Q6UN15 594 aaKnown RBP15.09■□□□□ 0.01
LIG1-216ENST00000598938 GLCCI1Q86VQ1 547 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 TMEM186Q96B77 213 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 FOXRED1Q96CU9 486 aaPredicted RBP15.09■□□□□ 0.01
LIG1-216ENST00000598938 GFI1Q99684 422 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 BEX2Q9BXY8 128 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 METTL9Q9H1A3 318 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 OR51E2Q9H255 320 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 TXNL4BQ9NX01 149 aaKnown RBP15.09■□□□□ 0.01
LIG1-216ENST00000598938 OR14J1Q9UGF5 321 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 ING4Q9UNL4 249 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 MAB21L2Q9Y586 359 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 ANK2Q01484 3957 aa15.09■□□□□ 0.01
LIG1-216ENST00000598938 PPIAL4CA0A0B4J2A2 164 aa15.08■□□□□ 0
LIG1-216ENST00000598938 CDRT1O95170 752 aa15.08■□□□□ 0
LIG1-216ENST00000598938 CALCBP10092 127 aa15.08■□□□□ 0
LIG1-216ENST00000598938 BMXP51813 675 aa15.08■□□□□ 0
LIG1-216ENST00000598938 FGF12P61328 243 aa15.08■□□□□ 0
LIG1-216ENST00000598938 PAX2Q02962 417 aa15.08■□□□□ 0
LIG1-216ENST00000598938 RSU1Q15404 277 aa15.08■□□□□ 0
LIG1-216ENST00000598938 SPIN3Q5JUX0 258 aa15.08■□□□□ 0
LIG1-216ENST00000598938 C1orf100Q5SVJ3 147 aa15.08■□□□□ 0
LIG1-216ENST00000598938 GLT8D1Q68CQ7 371 aa15.08■□□□□ 0
LIG1-216ENST00000598938 OR4D6Q8NGJ1 314 aa15.08■□□□□ 0
LIG1-216ENST00000598938 YIPF6Q96EC8 236 aa15.08■□□□□ 0
LIG1-216ENST00000598938 MRPS26Q9BYN8 205 aaKnown RBP15.08■□□□□ 0
LIG1-216ENST00000598938 HIF1ANQ9NWT6 349 aa15.08■□□□□ 0
LIG1-216ENST00000598938 METRNQ9UJH8 293 aa15.08■□□□□ 0
LIG1-216ENST00000598938 SSR3Q9UNL2 185 aa15.08■□□□□ 0
LIG1-216ENST00000598938 MRPS28Q9Y2Q9 187 aaKnown RBP15.08■□□□□ 0
LIG1-216ENST00000598938 SHISA3A0PJX4 238 aa15.07■□□□□ 0
LIG1-216ENST00000598938 HAX1O00165 279 aa15.07■□□□□ 0
LIG1-216ENST00000598938 NDUFB3O43676 98 aa15.07■□□□□ 0
LIG1-216ENST00000598938 HAND1O96004 215 aa15.07■□□□□ 0
LIG1-216ENST00000598938 GADD45AP24522 165 aa15.07■□□□□ 0
LIG1-216ENST00000598938 IKZF1Q13422 519 aa15.07■□□□□ 0
LIG1-216ENST00000598938 C11orf91Q3C1V1 193 aa15.07■□□□□ 0
LIG1-216ENST00000598938 LRRC10Q5BKY1 277 aa15.07■□□□□ 0
LIG1-216ENST00000598938 FGFRL1Q8N441 504 aa15.07■□□□□ 0
LIG1-216ENST00000598938 ZNF561Q8N587 486 aa15.07■□□□□ 0
LIG1-216ENST00000598938 ZNRF1Q8ND25 227 aa15.07■□□□□ 0
LIG1-216ENST00000598938 OR51T1Q8NGJ9 327 aa15.07■□□□□ 0
LIG1-216ENST00000598938 OR10K1Q8NGX5 313 aa15.07■□□□□ 0
LIG1-216ENST00000598938 TBC1D15Q8TC07 691 aa15.07■□□□□ 0
LIG1-216ENST00000598938 DACT3Q96B18 629 aaPredicted RBP15.07■□□□□ 0
LIG1-216ENST00000598938 C1orf147Q96MC9 270 aaPredicted RBP15.07■□□□□ 0
LIG1-216ENST00000598938 S100A13Q99584 98 aa15.07■□□□□ 0
LIG1-216ENST00000598938 ELL3Q9HB65 397 aaPredicted RBP15.07■□□□□ 0
LIG1-216ENST00000598938 EXOSC4Q9NPD3 245 aaKnown RBP15.07■□□□□ 0
LIG1-216ENST00000598938 OR5V1Q9UGF6 321 aa15.07■□□□□ 0
LIG1-216ENST00000598938 KCNS2Q9ULS6 477 aa15.07■□□□□ 0
LIG1-216ENST00000598938 AK6Q9Y3D8 172 aaKnown RBP15.07■□□□□ 0
LIG1-216ENST00000598938 GPR37O15354 613 aa15.06■□□□□ 0
LIG1-216ENST00000598938 ZNF780AO75290 641 aaPredicted RBP15.06■□□□□ 0
LIG1-216ENST00000598938 CHRM2P08172 466 aa15.06■□□□□ 0
LIG1-216ENST00000598938 MYL9P24844 172 aa15.06■□□□□ 0
LIG1-216ENST00000598938 DUSP1P28562 367 aa15.06■□□□□ 0
LIG1-216ENST00000598938 CAV3P56539 151 aa15.06■□□□□ 0
LIG1-216ENST00000598938 COL10A1Q03692 680 aa15.06■□□□□ 0
LIG1-216ENST00000598938 AWAT2Q6E213 333 aa15.06■□□□□ 0
LIG1-216ENST00000598938 GLIPR1L1Q6UWM5 242 aa15.06■□□□□ 0
LIG1-216ENST00000598938 ST8SIA4Q92187 359 aa15.06■□□□□ 0
LIG1-216ENST00000598938 MMP26Q9NRE1 261 aa15.06■□□□□ 0
LIG1-216ENST00000598938 SLC25A10Q9UBX3 287 aaPredicted RBP15.06■□□□□ 0
LIG1-216ENST00000598938 GSTK1Q9Y2Q3 226 aa15.06■□□□□ 0
LIG1-216ENST00000598938 LOC105371242A0A075B767 164 aa15.05■□□□□ -0
LIG1-216ENST00000598938 C22orf46C9J442 243 aa15.05■□□□□ -0
LIG1-216ENST00000598938 SLC22A1O15245 554 aa15.05■□□□□ -0
LIG1-216ENST00000598938 ZNF737O75373 536 aa15.05■□□□□ -0
LIG1-216ENST00000598938 HTR3BO95264 441 aa15.05■□□□□ -0
LIG1-216ENST00000598938 GATA3P23771 443 aa15.05■□□□□ -0
LIG1-216ENST00000598938 SNU13P55769 128 aaKnown RBP15.05■□□□□ -0
LIG1-216ENST00000598938 GPR176Q14439 515 aa15.05■□□□□ -0
LIG1-216ENST00000598938 NHLRC3Q5JS37 347 aa15.05■□□□□ -0
LIG1-216ENST00000598938 CD276Q5ZPR3 534 aa15.05■□□□□ -0
LIG1-216ENST00000598938 OSR2Q8N2R0 312 aa15.05■□□□□ -0
LIG1-216ENST00000598938 TMEM185AQ8NFB2 350 aa15.05■□□□□ -0
LIG1-216ENST00000598938 OR6M1Q8NGM8 313 aa15.05■□□□□ -0
LIG1-216ENST00000598938 OR13F1Q8NGS4 319 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms