RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 LMX1BO60663 402 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 IL1AP01583 271 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 AZGP1P25311 298 aaKnown RBP8.75□□□□□ -1.01
SMG9-207ENST00000598860 PTH2RP49190 550 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 ZNF81P51508 661 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 FUT6P51993 359 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 VAMP2P63027 116 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 INSL4Q14641 139 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 OR8G1Q15617 311 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 CTF1Q16619 201 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 PCGF3Q3KNV8 242 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 CEACAM21Q3KPI0 293 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 Q5PR19 223 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 LCE5AQ5TCM9 118 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 GLT8D1Q68CQ7 371 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 IGFL4Q6B9Z1 124 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 PRSS57Q6UWY2 283 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 USP43Q70EL4 1123 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 MOB3CQ70IA8 216 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 LRP11Q86VZ4 500 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 CROCCP3Q8IVE0 287 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 OR5A2Q8NGI9 324 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 OR13C9Q8NGT0 318 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 IGFBPL1Q8WX77 278 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 RPL3LQ92901 407 aaKnown RBP8.75□□□□□ -1.01
SMG9-207ENST00000598860 ISOC1Q96CN7 298 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 BORCS8Q96FH0 119 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 TRMT61AQ96FX7 289 aaKnown RBP8.75□□□□□ -1.01
SMG9-207ENST00000598860 AIFM2Q9BRQ8 373 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 GPR173Q9NS66 373 aa8.75□□□□□ -1.01
SMG9-207ENST00000598860 ZNF701Q9NV72 531 aaPredicted RBP8.75□□□□□ -1.01
SMG9-207ENST00000598860 MYEF2Q9P2K5 600 aaKnown RBP8.75□□□□□ -1.01
SMG9-207ENST00000598860 SETD2Q9BYW2 2564 aaPredicted RBP8.74□□□□□ -1.01
SMG9-207ENST00000598860 AKAP9Q99996 3911 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 TRAV8-7A0A075B6U6 113 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 A0A1W2PPK0 400 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 C17orf100A8MU93 164 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 CD55P08174 381 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 HCKP08631 526 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 DANCRP0C864 163 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 PAX1P15863 534 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 RAB3BP20337 219 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 CA6P23280 308 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 CD200P41217 278 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 MAGEB1P43366 347 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 SRP9P49458 86 aaKnown RBP8.74□□□□□ -1.01
SMG9-207ENST00000598860 RBP2P50120 134 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 CAPZA1P52907 286 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 ATP1B3P54709 279 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 ATP5J2P56134 94 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 FAM3BP58499 235 aaPredicted RBP8.74□□□□□ -1.01
SMG9-207ENST00000598860 SUMO2P61956 95 aaKnown RBP8.74□□□□□ -1.01
SMG9-207ENST00000598860 LSM3P62310 102 aaKnown RBP8.74□□□□□ -1.01
SMG9-207ENST00000598860 GNG3P63215 75 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 UBE2V2Q15819 145 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 ALKBH6Q3KRA9 238 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 TMEM255AQ5JRV8 349 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 FAM27D1Q5T7N8 215 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 DDI2Q5TDH0 399 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 ASPHD2Q6ICH7 369 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 PNLDC1Q8NA58 520 aaKnown RBP8.74□□□□□ -1.01
SMG9-207ENST00000598860 OR5P3Q8WZ94 311 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 NPIPB3Q92617 1050 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 C12orf43Q96C57 262 aaKnown RBP8.74□□□□□ -1.01
SMG9-207ENST00000598860 DGCR14Q96DF8 476 aaKnown RBP8.74□□□□□ -1.01
SMG9-207ENST00000598860 ELMOD3Q96FG2 381 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 Q96MF0 132 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 NAA50Q9GZZ1 169 aaKnown RBP8.74□□□□□ -1.01
SMG9-207ENST00000598860 METTL17Q9H7H0 456 aaPredicted RBP8.74□□□□□ -1.01
SMG9-207ENST00000598860 DOCK11Q5JSL3 2073 aa8.74□□□□□ -1.01
SMG9-207ENST00000598860 LRP5LA4QPB2 252 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 TRIM64BA6NI03 449 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 A6NIN4 97 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 ZSCAN5BA6NJL1 495 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 OVOL3O00110 214 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 MLNRO43193 412 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 MAS1P04201 325 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 SOD3P08294 240 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 SERPINB10P48595 397 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 VBP1P61758 197 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 NCS1P62166 190 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 CEP78Q5JTW2 689 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 C11orf71Q6IPW1 123 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 Q6ZR03 302 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 LRRTM1Q86UE6 522 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 ZNF573Q86YE8 665 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 OR2Z1Q8NG97 314 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 OR51A2Q8NGJ7 313 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 HPSE2Q8WWQ2 592 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 ERGIC1Q969X5 290 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 RNF170Q96K19 258 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 UQCC2Q9BRT2 126 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 TRAF4Q9BUZ4 470 aaPredicted RBP8.73□□□□□ -1.01
SMG9-207ENST00000598860 EGLN1Q9GZT9 426 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 DCSTAMPQ9H295 470 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 PPIL3Q9H2H8 161 aaKnown RBP8.73□□□□□ -1.01
SMG9-207ENST00000598860 IL19Q9UHD0 177 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 V9GY05 133 aa8.73□□□□□ -1.01
SMG9-207ENST00000598860 IGKV1-9A0A0C4DH69 117 aa8.72□□□□□ -1.01
SMG9-207ENST00000598860 PQLC2LA1A4F0 135 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms