RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 DUSP1P28562 367 aa17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 GABRA2P47869 451 aa17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 PITPNBP48739 271 aa17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 DVL1P1P54792 670 aaPredicted RBP17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 ATPAF1Q5TC12 328 aaPredicted RBP17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 ASCL4Q6XD76 172 aa17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 ZNF788Q6ZQV5 615 aa17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 FAM58AQ8N1B3 248 aa17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 ZSCAN4Q8NAM6 433 aaPredicted RBP17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 OR8B3Q8NGG8 313 aa17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 YIPF6Q96EC8 236 aa17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 OR8B2Q96RD0 313 aa17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 RNF167Q9H6Y7 350 aa17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 VCX3AQ9NNX9 186 aa17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 HMG20AQ9NP66 347 aa17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 EXOSC4Q9NPD3 245 aaKnown RBP17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 TXNL4BQ9NX01 149 aaKnown RBP17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 KAAG1Q9UBP8 84 aa17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 OR14J1Q9UGF5 321 aa17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 STUB1Q9UNE7 303 aa17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 ING4Q9UNL4 249 aa17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 AK6Q9Y3D8 172 aaKnown RBP17.81■□□□□ 0.44
R3HDM4-206ENST00000590454 NDUFA2O43678 99 aa17.8■□□□□ 0.44
R3HDM4-206ENST00000590454 ARL6IP5O75915 188 aa17.8■□□□□ 0.44
R3HDM4-206ENST00000590454 PRKACAP17612 351 aa17.8■□□□□ 0.44
R3HDM4-206ENST00000590454 PRDX2P32119 198 aa17.8■□□□□ 0.44
R3HDM4-206ENST00000590454 IKZF1Q13422 519 aa17.8■□□□□ 0.44
R3HDM4-206ENST00000590454 DGUOKQ16854 277 aa17.8■□□□□ 0.44
R3HDM4-206ENST00000590454 PXT1Q8NFP0 134 aa17.8■□□□□ 0.44
R3HDM4-206ENST00000590454 CPNE2Q96FN4 548 aaPredicted RBP17.8■□□□□ 0.44
R3HDM4-206ENST00000590454 CHCHD6Q9BRQ6 235 aa17.8■□□□□ 0.44
R3HDM4-206ENST00000590454 ELL3Q9HB65 397 aaPredicted RBP17.8■□□□□ 0.44
R3HDM4-206ENST00000590454 MAB21L2Q9Y586 359 aa17.8■□□□□ 0.44
R3HDM4-206ENST00000590454 A0A1W2PP11 408 aa17.79■□□□□ 0.44
R3HDM4-206ENST00000590454 B4DSR2 109 aa17.79■□□□□ 0.44
R3HDM4-206ENST00000590454 DVL1O14640 695 aa17.79■□□□□ 0.44
R3HDM4-206ENST00000590454 KNG1P01042 644 aa17.79■□□□□ 0.44
R3HDM4-206ENST00000590454 MSMBP08118 114 aa17.79■□□□□ 0.44
R3HDM4-206ENST00000590454 GALP22466 123 aa17.79■□□□□ 0.44
R3HDM4-206ENST00000590454 ESCO2Q56NI9 601 aa17.79■□□□□ 0.44
R3HDM4-206ENST00000590454 WDR25Q64LD2 544 aaPredicted RBP17.79■□□□□ 0.44
R3HDM4-206ENST00000590454 NLRC3Q7RTR2 1065 aa17.79■□□□□ 0.44
R3HDM4-206ENST00000590454 Q8IYB0 196 aa17.79■□□□□ 0.44
R3HDM4-206ENST00000590454 NKAIN3Q8N8D7 197 aa17.79■□□□□ 0.44
R3HDM4-206ENST00000590454 ZNRF1Q8ND25 227 aa17.79■□□□□ 0.44
R3HDM4-206ENST00000590454 GCDHQ92947 438 aaPredicted RBP17.79■□□□□ 0.44
R3HDM4-206ENST00000590454 SSBP3Q9BWW4 388 aaPredicted RBP17.79■□□□□ 0.44
R3HDM4-206ENST00000590454 MRPS26Q9BYN8 205 aaKnown RBP17.79■□□□□ 0.44
R3HDM4-206ENST00000590454 MMP26Q9NRE1 261 aa17.79■□□□□ 0.44
R3HDM4-206ENST00000590454 MRPS28Q9Y2Q9 187 aaKnown RBP17.79■□□□□ 0.44
R3HDM4-206ENST00000590454 DOCK11Q5JSL3 2073 aa17.79■□□□□ 0.44
R3HDM4-206ENST00000590454 TMEM89A2RUT3 159 aa17.78■□□□□ 0.44
R3HDM4-206ENST00000590454 MEGF11A6BM72 1044 aa17.78■□□□□ 0.44
R3HDM4-206ENST00000590454 SIGLEC5O15389 551 aa17.78■□□□□ 0.44
R3HDM4-206ENST00000590454 CD37P11049 281 aa17.78■□□□□ 0.44
R3HDM4-206ENST00000590454 FGF9P31371 208 aaPredicted RBP17.78■□□□□ 0.44
R3HDM4-206ENST00000590454 OR10A3P58181 314 aa17.78■□□□□ 0.44
R3HDM4-206ENST00000590454 GNB2P62879 340 aa17.78■□□□□ 0.44
R3HDM4-206ENST00000590454 SCGB2A2Q13296 93 aa17.78■□□□□ 0.44
R3HDM4-206ENST00000590454 PDCD1Q15116 288 aa17.78■□□□□ 0.44
R3HDM4-206ENST00000590454 RSU1Q15404 277 aa17.78■□□□□ 0.44
R3HDM4-206ENST00000590454 GLIPR1L1Q6UWM5 242 aa17.78■□□□□ 0.44
R3HDM4-206ENST00000590454 CDH26Q8IXH8 852 aa17.78■□□□□ 0.44
R3HDM4-206ENST00000590454 PNLDC1Q8NA58 520 aaKnown RBP17.78■□□□□ 0.44
R3HDM4-206ENST00000590454 SDSLQ96GA7 329 aa17.78■□□□□ 0.44
R3HDM4-206ENST00000590454 C1orf147Q96MC9 270 aaPredicted RBP17.78■□□□□ 0.44
R3HDM4-206ENST00000590454 CENPOQ9BU64 300 aa17.78■□□□□ 0.44
R3HDM4-206ENST00000590454 SLITRK2Q9H156 845 aa17.78■□□□□ 0.44
R3HDM4-206ENST00000590454 ZNF581Q9P0T4 197 aa17.78■□□□□ 0.44
R3HDM4-206ENST00000590454 CLN8Q9UBY8 286 aa17.78■□□□□ 0.44
R3HDM4-206ENST00000590454 GSTK1Q9Y2Q3 226 aa17.78■□□□□ 0.44
R3HDM4-206ENST00000590454 LOC100506127A0A0U1RQW1 187 aa17.77■□□□□ 0.44
R3HDM4-206ENST00000590454 NKX6-3A6NJ46 265 aa17.77■□□□□ 0.44
R3HDM4-206ENST00000590454 A8MXK9 166 aa17.77■□□□□ 0.44
R3HDM4-206ENST00000590454 HTR3BO95264 441 aa17.77■□□□□ 0.44
R3HDM4-206ENST00000590454 TGFBR1P36897 503 aa17.77■□□□□ 0.44
R3HDM4-206ENST00000590454 IL13RA1P78552 427 aa17.77■□□□□ 0.44
R3HDM4-206ENST00000590454 COL10A1Q03692 680 aa17.77■□□□□ 0.44
R3HDM4-206ENST00000590454 C1orf100Q5SVJ3 147 aa17.77■□□□□ 0.44
R3HDM4-206ENST00000590454 METAP1DQ6UB28 335 aaPredicted RBP17.77■□□□□ 0.44
R3HDM4-206ENST00000590454 NR2C2APQ86WQ0 139 aa17.77■□□□□ 0.44
R3HDM4-206ENST00000590454 OR13F1Q8NGS4 319 aa17.77■□□□□ 0.44
R3HDM4-206ENST00000590454 ZNF418Q8TF45 676 aaPredicted RBP17.77■□□□□ 0.44
R3HDM4-206ENST00000590454 DNTTIP1Q9H147 329 aa17.77■□□□□ 0.44
R3HDM4-206ENST00000590454 METTL9Q9H1A3 318 aa17.77■□□□□ 0.44
R3HDM4-206ENST00000590454 KCNK15Q9H427 330 aa17.77■□□□□ 0.44
R3HDM4-206ENST00000590454 HIF1ANQ9NWT6 349 aa17.77■□□□□ 0.44
R3HDM4-206ENST00000590454 SSR3Q9UNL2 185 aa17.77■□□□□ 0.44
R3HDM4-206ENST00000590454 TRAV1-2A0A0B4J238 106 aa17.76■□□□□ 0.43
R3HDM4-206ENST00000590454 SMIM30A4D0T7 59 aa17.76■□□□□ 0.43
R3HDM4-206ENST00000590454 C22orf46C9J442 243 aa17.76■□□□□ 0.43
R3HDM4-206ENST00000590454 HAND1O96004 215 aa17.76■□□□□ 0.43
R3HDM4-206ENST00000590454 TFAP2AP05549 437 aa17.76■□□□□ 0.43
R3HDM4-206ENST00000590454 FGF12P61328 243 aa17.76■□□□□ 0.43
R3HDM4-206ENST00000590454 PAX2Q02962 417 aa17.76■□□□□ 0.43
R3HDM4-206ENST00000590454 ZNF146Q15072 292 aa17.76■□□□□ 0.43
R3HDM4-206ENST00000590454 PIGYQ3MUY2 71 aa17.76■□□□□ 0.43
R3HDM4-206ENST00000590454 SLC22A6Q4U2R8 563 aa17.76■□□□□ 0.43
R3HDM4-206ENST00000590454 GLT8D1Q68CQ7 371 aa17.76■□□□□ 0.43
R3HDM4-206ENST00000590454 AWAT2Q6E213 333 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms