RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 A0A1B0GX12 115 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 PLSCR5A0PG75 271 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 ANKRD20A5PA0PJZ0 165 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 FAM183AA6NL82 134 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 RIIAD1A6NNX1 92 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 CYTIPO60759 359 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 B3GALNT1O75752 331 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 NDUFA7O95182 113 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 UTS2O95399 124 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 CECR9P0C854 216 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 IGHV4-38-2P0DP08 117 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 CALCBP10092 127 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 ZP3P21754 424 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 ATP6V1E1P36543 226 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 AP3S2P59780 193 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 NAAAQ02083 359 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 OR1Q1Q15612 314 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 DUSP5Q16690 384 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 TMEM176BQ3YBM2 270 aaPredicted RBP6.45□□□□□ -1.38
SMAD4-209ENST00000589941 NHLRC3Q5JS37 347 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 SLC35D3Q5M8T2 416 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 PDSS1Q5T2R2 415 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 ZNF684Q5T5D7 378 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 RPL22L1Q6P5R6 122 aaKnown RBP6.45□□□□□ -1.38
SMAD4-209ENST00000589941 FIP1L1Q6UN15 594 aaKnown RBP6.45□□□□□ -1.38
SMAD4-209ENST00000589941 SZRD1Q7Z422 152 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 HMGN2P46Q86SG4 172 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 COMMD7Q86VX2 200 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 EIF4E3Q8N5X7 224 aaKnown RBP6.45□□□□□ -1.38
SMAD4-209ENST00000589941 OR2T4Q8NH00 348 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 OR5J2Q8NH18 312 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 LINC01006Q8NI28 216 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 LHFPL5Q8TAF8 219 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 C15orf40Q8WUR7 153 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 ASB13Q8WXK3 278 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 GHSRQ92847 366 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 CDS1Q92903 461 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 BPIFA2Q96DR5 249 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 SLC25A38Q96DW6 304 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 PELI1Q96FA3 418 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 C4orf36Q96KX1 117 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 GFI1Q99684 422 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 QTRT1Q9BXR0 403 aaKnown RBP6.45□□□□□ -1.38
SMAD4-209ENST00000589941 TBL1XR1Q9BZK7 514 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 CHIAQ9BZP6 476 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 C20orf85Q9H1P6 137 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 MED20Q9H944 212 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 FN3KRPQ9HA64 309 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 CACYBPQ9HB71 228 aaKnown RBP6.45□□□□□ -1.38
SMAD4-209ENST00000589941 NRIP3Q9NQ35 241 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 MEPEQ9NQ76 525 aaPredicted RBP6.45□□□□□ -1.38
SMAD4-209ENST00000589941 SDHAF3Q9NRP4 125 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 C20orf141Q9NUB4 165 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 TAS2R5Q9NYW4 299 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 MYEF2Q9P2K5 600 aaKnown RBP6.45□□□□□ -1.38
SMAD4-209ENST00000589941 RPS6KB2Q9UBS0 482 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 CHRNA9Q9UGM1 479 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 AMDHD2Q9Y303 409 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 MAB21L2Q9Y586 359 aa6.45□□□□□ -1.38
SMAD4-209ENST00000589941 HECTD4Q9Y4D8 3996 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 TRAV6A0A075B6T7 132 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 A0A087WZY1 265 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 GXYLT2A0PJZ3 443 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 C5orf63A6NC05 138 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 MFSD2BA6NFX1 497 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 ZNF716A6NP11 495 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 ZNF724A8MTY0 619 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 AIPO00170 330 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 PDCD5O14737 125 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 ARPC3O15145 178 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 NKX2-2O95096 273 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 CFDP00746 253 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-209ENST00000589941 IFNGP01579 166 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 MBPP02686 304 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-209ENST00000589941 ERCC1P07992 297 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-209ENST00000589941 MELTFP08582 738 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 CD3GP09693 182 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 IFI30P13284 250 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 PRG2P13727 222 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 ZNF250P15622 560 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 ZNF3P17036 446 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 MAPK3P27361 379 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-209ENST00000589941 LCN1P31025 176 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 SLC6A6P31641 620 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 ALDH3B1P43353 468 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 SRP9P49458 86 aaKnown RBP6.44□□□□□ -1.38
SMAD4-209ENST00000589941 GDI2P50395 445 aaKnown RBP6.44□□□□□ -1.38
SMAD4-209ENST00000589941 ZNF41P51814 821 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-209ENST00000589941 GBX2P52951 348 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-209ENST00000589941 OR12D2P58182 307 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 CFHR3Q02985 330 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 SNTB2Q13425 540 aaKnown RBP6.44□□□□□ -1.38
SMAD4-209ENST00000589941 MADCAM1Q13477 382 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 DCST2Q5T1A1 773 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 MRPL2Q5T653 305 aaKnown RBP6.44□□□□□ -1.38
SMAD4-209ENST00000589941 GLDNQ6ZMI3 551 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-209ENST00000589941 SSX6Q7RTT6 188 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 TIGD4Q8IY51 512 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 CDRT4Q8N9R6 151 aa6.44□□□□□ -1.38
SMAD4-209ENST00000589941 OR10H4Q8NGA5 316 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms