RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 NEDD8Q15843 81 aa19.18■□□□□ 0.66
LSM7-202ENST00000585395 SPIN3Q5JUX0 258 aa19.18■□□□□ 0.66
LSM7-202ENST00000585395 GLT8D1Q68CQ7 371 aa19.18■□□□□ 0.66
LSM7-202ENST00000585395 ZNF561Q8N587 486 aa19.18■□□□□ 0.66
LSM7-202ENST00000585395 JAGN1Q8N5M9 183 aa19.18■□□□□ 0.66
LSM7-202ENST00000585395 ZNF418Q8TF45 676 aaPredicted RBP19.18■□□□□ 0.66
LSM7-202ENST00000585395 SEH1LQ96EE3 360 aa19.18■□□□□ 0.66
LSM7-202ENST00000585395 METTL9Q9H1A3 318 aa19.18■□□□□ 0.66
LSM7-202ENST00000585395 SF3B6Q9Y3B4 125 aaKnown RBP19.18■□□□□ 0.66
LSM7-202ENST00000585395 AUP1Q9Y679 476 aa19.18■□□□□ 0.66
LSM7-202ENST00000585395 RFPL4AA6NLU0 287 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 RFPL4AL1F8VTS6 287 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 DVL1O14640 695 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 SIGLEC5O15389 551 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 PIN1P1O15428 100 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 ANGPTL7O43827 346 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 CHRM2P08172 466 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 PRKACAP17612 351 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 SRMP19623 302 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 BCL3P20749 454 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 CFPP27918 469 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 PRDX2P32119 198 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 PTGFRP43088 359 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 ZP1P60852 638 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 GPR176Q14439 515 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 SYT6Q5T7P8 510 aaPredicted RBP19.17■□□□□ 0.66
LSM7-202ENST00000585395 C12orf54Q6X4T0 127 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 BPIFB2Q8N4F0 458 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 ORAI1Q96D31 301 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 SDSLQ96GA7 329 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 UQCC2Q9BRT2 126 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 SEBOXQ9HB31 216 aaPredicted RBP19.17■□□□□ 0.66
LSM7-202ENST00000585395 CTSZQ9UBR2 303 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 OR14J1Q9UGF5 321 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 INSIG2Q9Y5U4 225 aa19.17■□□□□ 0.66
LSM7-202ENST00000585395 CSTBP04080 98 aaKnown RBP19.16■□□□□ 0.66
LSM7-202ENST00000585395 PSMD7P51665 324 aa19.16■□□□□ 0.66
LSM7-202ENST00000585395 SSX1Q16384 188 aa19.16■□□□□ 0.66
LSM7-202ENST00000585395 C1orf229Q6ZS94 237 aaPredicted RBP19.16■□□□□ 0.66
LSM7-202ENST00000585395 PPP1R35Q8TAP8 253 aa19.16■□□□□ 0.66
LSM7-202ENST00000585395 ST8SIA4Q92187 359 aa19.16■□□□□ 0.66
LSM7-202ENST00000585395 GAFA1Q96PS6 74 aa19.16■□□□□ 0.66
LSM7-202ENST00000585395 HMG20AQ9NP66 347 aa19.16■□□□□ 0.66
LSM7-202ENST00000585395 ZNF222Q9UK12 451 aa19.16■□□□□ 0.66
LSM7-202ENST00000585395 ING4Q9UNL4 249 aa19.16■□□□□ 0.66
LSM7-202ENST00000585395 IGKV1D-17A0A075B6S4 117 aa19.15■□□□□ 0.66
LSM7-202ENST00000585395 TRDV1A0A1B0GX56 115 aa19.15■□□□□ 0.66
LSM7-202ENST00000585395 ENSAO43768 121 aaKnown RBP19.15■□□□□ 0.66
LSM7-202ENST00000585395 LIPFP07098 398 aa19.15■□□□□ 0.66
LSM7-202ENST00000585395 MYL9P24844 172 aa19.15■□□□□ 0.66
LSM7-202ENST00000585395 CAPZA1P52907 286 aa19.15■□□□□ 0.66
LSM7-202ENST00000585395 FABP5Q01469 135 aa19.15■□□□□ 0.66
LSM7-202ENST00000585395 IKZF1Q13422 519 aa19.15■□□□□ 0.66
LSM7-202ENST00000585395 ZNF841Q6ZN19 808 aa19.15■□□□□ 0.66
LSM7-202ENST00000585395 TMEM91Q6ZNR0 172 aa19.15■□□□□ 0.66
LSM7-202ENST00000585395 BATF2Q8N1L9 274 aa19.15■□□□□ 0.66
LSM7-202ENST00000585395 FAM216BQ8N7L0 139 aa19.15■□□□□ 0.66
LSM7-202ENST00000585395 TMEM185AQ8NFB2 350 aa19.15■□□□□ 0.66
LSM7-202ENST00000585395 FAM234AQ9H0X4 552 aa19.15■□□□□ 0.66
LSM7-202ENST00000585395 RBFOX1Q9NWB1 397 aaKnown RBP19.15■□□□□ 0.66
LSM7-202ENST00000585395 IL36GQ9NZH8 169 aa19.15■□□□□ 0.66
LSM7-202ENST00000585395 SLC25A10Q9UBX3 287 aaPredicted RBP19.15■□□□□ 0.66
LSM7-202ENST00000585395 GSTK1Q9Y2Q3 226 aa19.15■□□□□ 0.66
LSM7-202ENST00000585395 IGHV2-70DA0A0C4DH43 119 aa19.14■□□□□ 0.65
LSM7-202ENST00000585395 PDCD5O14737 125 aa19.14■□□□□ 0.65
LSM7-202ENST00000585395 SH2D1BO14796 132 aa19.14■□□□□ 0.65
LSM7-202ENST00000585395 FPR2P25090 351 aa19.14■□□□□ 0.65
LSM7-202ENST00000585395 NPBWR2P48146 333 aa19.14■□□□□ 0.65
LSM7-202ENST00000585395 CAV3P56539 151 aa19.14■□□□□ 0.65
LSM7-202ENST00000585395 INSL4Q14641 139 aa19.14■□□□□ 0.65
LSM7-202ENST00000585395 ELP2Q6IA86 826 aa19.14■□□□□ 0.65
LSM7-202ENST00000585395 CD200R1LQ6Q8B3 271 aa19.14■□□□□ 0.65
LSM7-202ENST00000585395 ASCL4Q6XD76 172 aa19.14■□□□□ 0.65
LSM7-202ENST00000585395 RAB40AQ8WXH6 277 aa19.14■□□□□ 0.65
LSM7-202ENST00000585395 DMRTB1Q96MA1 342 aa19.14■□□□□ 0.65
LSM7-202ENST00000585395 NUDT16L1Q9BRJ7 211 aaKnown RBP19.14■□□□□ 0.65
LSM7-202ENST00000585395 EXOSC4Q9NPD3 245 aaKnown RBP19.14■□□□□ 0.65
LSM7-202ENST00000585395 GHRLQ9UBU3 117 aa19.14■□□□□ 0.65
LSM7-202ENST00000585395 STUB1Q9UNE7 303 aa19.14■□□□□ 0.65
LSM7-202ENST00000585395 SSR3Q9UNL2 185 aa19.14■□□□□ 0.65
LSM7-202ENST00000585395 IGKV1-12A0A0C4DH73 117 aa19.13■□□□□ 0.65
LSM7-202ENST00000585395 KCNAB3O43448 404 aa19.13■□□□□ 0.65
LSM7-202ENST00000585395 HAND1O96004 215 aa19.13■□□□□ 0.65
LSM7-202ENST00000585395 IGKV1D-12P01611 117 aa19.13■□□□□ 0.65
LSM7-202ENST00000585395 NDUFB7P17568 137 aa19.13■□□□□ 0.65
LSM7-202ENST00000585395 CALRP27797 417 aaKnown RBP19.13■□□□□ 0.65
LSM7-202ENST00000585395 OR3A4PP47883 348 aa19.13■□□□□ 0.65
LSM7-202ENST00000585395 FGF12P61328 243 aa19.13■□□□□ 0.65
LSM7-202ENST00000585395 ZNF146Q15072 292 aa19.13■□□□□ 0.65
LSM7-202ENST00000585395 TIMM50Q3ZCQ8 353 aa19.13■□□□□ 0.65
LSM7-202ENST00000585395 FAM27D1Q5T7N8 215 aa19.13■□□□□ 0.65
LSM7-202ENST00000585395 MUL1Q969V5 352 aa19.13■□□□□ 0.65
LSM7-202ENST00000585395 SUCNR1Q9BXA5 334 aa19.13■□□□□ 0.65
LSM7-202ENST00000585395 OPN4Q9UHM6 478 aa19.13■□□□□ 0.65
LSM7-202ENST00000585395 MRPS28Q9Y2Q9 187 aaKnown RBP19.13■□□□□ 0.65
LSM7-202ENST00000585395 F8VVB4 439 aa19.12■□□□□ 0.65
LSM7-202ENST00000585395 F8VWA3 439 aa19.12■□□□□ 0.65
LSM7-202ENST00000585395 HTR3BO95264 441 aa19.12■□□□□ 0.65
LSM7-202ENST00000585395 UBBP0CG47 229 aa19.12■□□□□ 0.65
LSM7-202ENST00000585395 AWAT2Q6E213 333 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms