RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 IKZF1Q13422 519 aa12.16□□□□□ -0.46
SCAMP4-209ENST00000585335 ZNF146Q15072 292 aa12.16□□□□□ -0.46
SCAMP4-209ENST00000585335 CD276Q5ZPR3 534 aa12.16□□□□□ -0.46
SCAMP4-209ENST00000585335 LURAP1LQ8IV03 231 aa12.16□□□□□ -0.46
SCAMP4-209ENST00000585335 CROCCP3Q8IVE0 287 aa12.16□□□□□ -0.46
SCAMP4-209ENST00000585335 FAM216BQ8N7L0 139 aa12.16□□□□□ -0.46
SCAMP4-209ENST00000585335 ASCC1Q8N9N2 400 aaKnown RBP12.16□□□□□ -0.46
SCAMP4-209ENST00000585335 TMEM185AQ8NFB2 350 aa12.16□□□□□ -0.46
SCAMP4-209ENST00000585335 Q8NFD4 153 aa12.16□□□□□ -0.46
SCAMP4-209ENST00000585335 KCNG3Q8TAE7 436 aa12.16□□□□□ -0.46
SCAMP4-209ENST00000585335 C1orf159Q96HA4 380 aa12.16□□□□□ -0.46
SCAMP4-209ENST00000585335 GAFA1Q96PS6 74 aa12.16□□□□□ -0.46
SCAMP4-209ENST00000585335 STEAP1Q9UHE8 339 aa12.16□□□□□ -0.46
SCAMP4-209ENST00000585335 ZNF222Q9UK12 451 aa12.16□□□□□ -0.46
SCAMP4-209ENST00000585335 OTOGQ6ZRI0 2925 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 SHISA3A0PJX4 238 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 IFITM5A6NNB3 132 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 A8MXK9 166 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 AIPO00170 330 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 DVL1O14640 695 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 DEGS1O15121 323 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 GABARAPO95166 117 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 MSMBP08118 114 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 IGHV4-31P0DP07 118 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 ZNF44P15621 663 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 MGMTP16455 207 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 RBM11P57052 281 aaKnown RBP12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 OR10A3P58181 314 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 SCN1BQ07699 218 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 P2RY14Q15391 338 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 C11orf91Q3C1V1 193 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 NHLRC3Q5JS37 347 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 HES5Q5TA89 166 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 WDR25Q64LD2 544 aaPredicted RBP12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 BIVMQ86UB2 503 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 GLCCI1Q86VQ1 547 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 CLVS1Q8IUQ0 354 aaPredicted RBP12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 CD177Q8N6Q3 437 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 CHST4Q8NCG5 386 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 OR51T1Q8NGJ9 327 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 ST8SIA4Q92187 359 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 GFI1Q99684 422 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 FAM234AQ9H0X4 552 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 RNF167Q9H6Y7 350 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 CTSZQ9UBR2 303 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 SLC25A10Q9UBX3 287 aaPredicted RBP12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 ST3GAL6Q9Y274 331 aa12.15□□□□□ -0.46
SCAMP4-209ENST00000585335 TRAV20A0A0B4J274 112 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 FAM157AC9JC47 383 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 TMEM127O75204 238 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 ECDO95905 644 aaPredicted RBP12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 IL1AP01583 271 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 NDUFB7P17568 137 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 GABRR1P24046 479 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 CFPP27918 469 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 DUSP1P28562 367 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 SERPINB10P48595 397 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 CEBPDP49716 269 aaPredicted RBP12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 LCN2P80188 198 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 COL10A1Q03692 680 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 FAM189A2Q15884 450 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 MPV17LQ2QL34 196 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 FAM166AQ6J272 317 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 OR2W3Q7Z3T1 314 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 OR5D13Q8NGL4 314 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 RAB2BQ8WUD1 216 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 FAM3DQ96BQ1 224 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 BCL7BQ9BQE9 202 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 URM1Q9BTM9 101 aaKnown RBP12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 TMEM59Q9BXS4 323 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 SELENOIQ9C0D9 397 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 SPACA1Q9HBV2 294 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 LPAR2Q9HBW0 351 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 IL36RNQ9UBH0 155 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 CSMD1Q96PZ7 3565 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 ITPR3Q14573 2671 aa12.14□□□□□ -0.47
SCAMP4-209ENST00000585335 CR1P17927 2039 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 AKAP9Q99996 3911 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 LOC105371242A0A075B767 164 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 SMIM30A4D0T7 59 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 FAM90A10PA6NDY2 464 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 FAM90A18PA6NE21 464 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 FAM90A16PA6NEW6 464 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 FAM90A20PA6NIJ5 464 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 FAM90A8PA6NJQ4 464 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 FAM90A7PA6NKC0 464 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 FAM90A22PA8MWA6 464 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 FAM90A12PA8MX19 464 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 FAM90A5PA8MXJ8 464 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 FAM90A23PA8MXZ1 464 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 SIRPB1O00241 398 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 PHF1O43189 567 aaPredicted RBP12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 OR7C1O76099 320 aaPredicted RBP12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 MPIG6BO95866 241 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 OR2H2O95918 312 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 TGFAP01135 160 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 FAM90A15PP0C7V4 464 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 FAM90A13PP0C7W8 464 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 FAM90A14PP0C7W9 464 aa12.13□□□□□ -0.47
SCAMP4-209ENST00000585335 FAM90A24PP0C7X0 464 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms